Gene Ava_4859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4859 
Symbol 
ID3679279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6122444 
End bp6123169 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content41% 
IMG OID637720216 
Productsugar fermentation stimulation protein A 
Protein accessionYP_325351 
Protein GI75911055 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00177092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000212378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGATT GGCTCTACAG TTACCCACCT TTATATCCTG GCATTTTGCT AAAGCGCTAT 
AAGCGCTTTT TCGCTGATGT ACAACTAGCT TCCGGCGAAG TCGTAACAGC ACATTGTCCC
AATACAGGCC CCATGACCGG AGTCTCAACT CTAGGGAGTG TGGTACAACT TTCTAAAAGT
GCCAATCCTA AGCGTAAATT GGCTTATACT CTAGAACTGA TTCAAGTACA CGATAACGAG
CCGACTTGGG TAGGTGTAAA TACAGCTTTA CCAAATCAGA TAGTCAAGTT GGCTTTGGCA
AAATACTTGT TTCCAGAGTT AGGTAGTTAT AACCACATCA AAAGTGAGGT AGTTTACGGG
GTAGATAAAA AAAGTCGGGT GGACTTCTTT TTGACAGGAA GTGATACAGA ACGCCCAATT
TATCTAGAGG TAAAAAATAC AACTTGGGCA AAAGGGACTT TAGCATTATT CCCCGATACA
GAAACCACAA GGGGACAAAA GCACTTACGG GAATTAATGA CGTTATTGCC ACAAACGCGA
TCAGTAATGC TGTATTTTAT TAATCGTGGT GATTGTACAG AGTTTGCCCC TGGTGATAGT
ACAGATCCTA TATATGGTAA GTTGTTACGA GAAGCGATCG CCTTAGGTTT AGAAGTTTTA
CCTTGTCGTT TCGATGTTAC CCCAGAAGGC ATCCGTTATT TAGGTTTAGC AAAACTGGTA
ATTTAA
 
Protein sequence
MIDWLYSYPP LYPGILLKRY KRFFADVQLA SGEVVTAHCP NTGPMTGVST LGSVVQLSKS 
ANPKRKLAYT LELIQVHDNE PTWVGVNTAL PNQIVKLALA KYLFPELGSY NHIKSEVVYG
VDKKSRVDFF LTGSDTERPI YLEVKNTTWA KGTLALFPDT ETTRGQKHLR ELMTLLPQTR
SVMLYFINRG DCTEFAPGDS TDPIYGKLLR EAIALGLEVL PCRFDVTPEG IRYLGLAKLV
I