Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4854 |
Symbol | |
ID | 3679274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6115184 |
End bp | 6116407 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637720211 |
Product | peptidase-like |
Protein accession | YP_325346 |
Protein GI | 75911050 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000508224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGAAC AGAAGAACAA AAATTATTGG TTCAAATTTA ACTTAGCTTT GATTGCTTCC ATGAGCAGTG GCTTAGTAGT TGCAAACTAT ACTTTGCCTA TAAAGGCTCT TGATATCCAT GAGAACTCTG GAAAACTGAT AATAGCTAAA ACCCCAGACG AGAGACAACC AGAAGCAGTA CAACAAGCTA TCGAGCAAAT CCCTACTTCT CCACCGCCTG CAACTCCACA ACAAAGCAAG CAATCAATCG AGTCACCCAT TCCTGTTCGT GAATCTTCCA ACTCAACAGC CTCTAATCCA ACTCCCCAAC CTAGAGAAAG TAATTCTGCA AATAGAACAT CCACACCATC AAATTCCAAC CCAACTTCTC AGCCGAGACA AACTAACTCT GCGCCTAGAA CATCTACACA GTCCAACTCT AACTCTAGAC AAACTAACTC TGCTTCACCG CAGAGAGGTC GTCAATCAGC TACAAATCCA GGTAGCCGCA ATTCAACTGC CAAAATTTCC CCTGTTTCCC TGTCTAATCT TCCTTTTAGG GAGATTAACT TCGTAGATAT CGCTTTTGGC GTACTTTCTA AAGGTGATTT TCAGTCCCAA GGAAGGTATT TTCATTTCTA TAAATTCGAG GGAAGAGAAA ACCAACTACT CCAAATCAGG CTGGGTGGTA GCACTGATTC ACGTCGCTCC AGCAATTTGA GTCTCAGTCC GTTTATGTTC CTCCTTGATC CTGATAATAA AGTGATCTTA AAAAGAGGTA GTGTTGGGAC AAATAGTGAT CTTCAGGATG CGTTTGTCTT TGTACGATTA CCTGTCAAAG GTACTTACAC GATTGCAGTG ACTAGTCGCA ACCCTGGTGA TACAGGACGT TATAGTTTAG CTCTCAGGAA TGATAGAGCC AGCTATATCC TAGACGAATC GGCGGAACTG AATGCTCAAA GTTTAACTAT TAAGCAAAAT CGCAGTGCTT ATAATGTGTC TCAGTTCCAA GGCAAAAAAA ATCAGCTTGT CAGTATTCGT GCAGATAGTG TCAATGAAGA GTTTTCTCCT TATATAGTCT TGCTGAATTC TCAAGGGAAG ACTATTGCTG CGGATAATGC TAAAGATGGT CTTTATAGTG CTTTAATTGA CCGAGCTAGG TTGCCTGAGG ATGATACCTA CTATATAGTT GTTACTTCCA ATAATCCCAA CAACCGTGGC ACATATCGAT TGACTCTTTT CTAA
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Protein sequence | MAEQKNKNYW FKFNLALIAS MSSGLVVANY TLPIKALDIH ENSGKLIIAK TPDERQPEAV QQAIEQIPTS PPPATPQQSK QSIESPIPVR ESSNSTASNP TPQPRESNSA NRTSTPSNSN PTSQPRQTNS APRTSTQSNS NSRQTNSASP QRGRQSATNP GSRNSTAKIS PVSLSNLPFR EINFVDIAFG VLSKGDFQSQ GRYFHFYKFE GRENQLLQIR LGGSTDSRRS SNLSLSPFMF LLDPDNKVIL KRGSVGTNSD LQDAFVFVRL PVKGTYTIAV TSRNPGDTGR YSLALRNDRA SYILDESAEL NAQSLTIKQN RSAYNVSQFQ GKKNQLVSIR ADSVNEEFSP YIVLLNSQGK TIAADNAKDG LYSALIDRAR LPEDDTYYIV VTSNNPNNRG TYRLTLF
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