| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4850 |
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| Symbol | |
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| ID | 3679348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6108360 |
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| End bp | 6110090 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720207 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_325342 |
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| Protein GI | 75911046 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00626433 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAAA AAATGTCACA ACTACCTCAT GTTTGGAAAC TATTACAGAA TTACGTTCGG
GGTACAAGGT CAACAGATAG GCCTACAACA AAGTATGTAG GTAGTCGCTC ATTTTTACCT
CTGGGAAAAT ACCAACAAAA ACCAGCCAAA GATGTAAACT TTTCTCAAGT TAATTTACAG
AAAGAAATTT TATGTGAAAG ATTACAAATC AGTTTAGAGG CATGGATAAG AGAGGATAGT
AGGGGGCAAT TTTCAACTAG TAGTAGCCAA CTCCAACAAG AGATTTATGA TTTACTCGGT
AATGGTGCAT TAACTCCAGA AATAGTCGAA AAAGTTATAG AATTGCCTAT CCTTGAAAGA
GAATTTCGCC CAGAGTTGCT ATTTCACCGC CTAGAAGACT TTTATCAACG TTGGTGTCGA
GGAGAATTTA TCGATGCGCC ACCAAGCGAG AACTTACCTC AGCGAAAATT GCTGGAGATG
GCAGCACAAA ATCAGGGTAT TGGACTGAGG CAGATTGATA TTTACGCCGG GCTTAATGTC
CTGATTTTAC TTCTAGAATT ACACCGCCAC GCCCAAGAGC AAGAAGAACT GCGGCAACAA
ATCAACTTTT ATCCTTCTTC CCCACCAGAT ACAGACAGCT TTTTCACCTC CCAACTACTG
CGGGTAATTA ATTATAGCGA TGCCATTGAA ATTGGCAACT TTAGTAATAT CGTGGGGGAA
TTTCTCCGGG ATGGTAATTT TCAAGGTGCA TACCTGGGAA ATGCCAACTT GACGGGAGTC
AACTTCAGTG GTGCTAACCT CAGTGGTGCA TACCTTGGTG ATGCCAACCT TACAGGCGCA
AACTTCCAAG GTGCTAACCT CACAGGTGCA GACTTTGGTG ATGCCAACCT CAGTAGTGTT
AATCTCAGTG GTGCTAACCT GAGTAGTGCC GACCTCAGCA GCGCCAACCT TACAGGTGCA
AACCTAAGCG GTGCTAACTT GGAACGTGCC GACCTCAGCC GCGCTGACTT GAGTAGCTGC
ATCCTCAATG ATGGCGAATT AAGCCACGCC AACCTCAGTG GTGTCAACTT CAGAGATGCC
GAACTCTGTC GCGCTAACCT CAGCAACGCC ATCTTATTTG GTGCTAACCT CAGTGATGCC
AACCTCAATC ATGTTGACCT CAGTCGCGCC GACCTTTGTC GTGCAGACCT GAGTGGTGCA
GACCTCACCC ACGCCACCCT CAACGGTACT AACCTCAGCG ACACCATTCT TTTTAGTACT
AACTTAAGTG ATGCCATTCT GGAGGCAGCC GACCTCAGTT ATGCCAAACT CAACGGCGCG
AAACTCAACT ACGCCAGACT CAACGGTGCT ATGTTCTTAG GTGCAGACCT CAGTGGCGTA
GATTTAACTG GCGTGGTTCT CAACGATGCC GATTTGAGTG GCGGAATTCT CAGCGAAGCC
GACCTCACAG GTGCAGACCT CAGCGATGCG GTACTTTTGG GTACTGACTT CAGCTTTGCC
AATCTCAACA GCGCCAACCT CAGTGGTAGT AACTTGAGTG GCGCAATTTT GAATGGTGCA
GACCTCAGTA GCGCTAACTT CAGTTATGCC ATTCTCGACG ATACAGACTT AAGTGAAGCC
AACCTAGAAG ATATGACCTG GGGAGAAATT CAGCAATGGG AAGGTGTGCG CGGTTTGGAG
ACAGCGCTGA ATCTGCCGGA GGCGTTGCGG GAAAAGTTGG GAAAGAGGTA A
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| Protein sequence | MDKKMSQLPH VWKLLQNYVR GTRSTDRPTT KYVGSRSFLP LGKYQQKPAK DVNFSQVNLQ
KEILCERLQI SLEAWIREDS RGQFSTSSSQ LQQEIYDLLG NGALTPEIVE KVIELPILER
EFRPELLFHR LEDFYQRWCR GEFIDAPPSE NLPQRKLLEM AAQNQGIGLR QIDIYAGLNV
LILLLELHRH AQEQEELRQQ INFYPSSPPD TDSFFTSQLL RVINYSDAIE IGNFSNIVGE
FLRDGNFQGA YLGNANLTGV NFSGANLSGA YLGDANLTGA NFQGANLTGA DFGDANLSSV
NLSGANLSSA DLSSANLTGA NLSGANLERA DLSRADLSSC ILNDGELSHA NLSGVNFRDA
ELCRANLSNA ILFGANLSDA NLNHVDLSRA DLCRADLSGA DLTHATLNGT NLSDTILFST
NLSDAILEAA DLSYAKLNGA KLNYARLNGA MFLGADLSGV DLTGVVLNDA DLSGGILSEA
DLTGADLSDA VLLGTDFSFA NLNSANLSGS NLSGAILNGA DLSSANFSYA ILDDTDLSEA
NLEDMTWGEI QQWEGVRGLE TALNLPEALR EKLGKR
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