Gene Ava_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4845 
Symbol 
ID3679343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6098040 
End bp6099410 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content34% 
IMG OID637720202 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_325337 
Protein GI75911041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0603533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0276215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGGT ACAAATCTTT AACATGGGGT GTTTTTACCA TTCTGATTTT TGGCTTAACC 
ACAATATATG TTAGCAAAAT CGTCAATGCT AACAATGGAG ATTCAATAAA TCAGGAAGCA
ATTAAAAACA ACTATCTATG GGCAGAGTTT GAAGCACAAG AATTTGGTCG AAACGGAGAT
GTCAGTCAAA GTTTAGGTAC AACATACTAC GTTGATCAAA GTCTTGGAAA TGACAGCAAT
CCTGGTACTA CAGAAAATCT AGCATTTAAG ACAATACAGA AAGCTAATCA AATAATAAAT
GAGGGAGATA TTGTTTATGT GAAAAATGGT ACTTATGACG AAAACATTAC AGTAACTAAA
TCTGGAAATC CCAATAATTG GATTGTGTTC CAAGCTTTTC CTGGACACAA GCCATTTGTT
AGAGGAACTC AAGACGGTAC TTTTAGAGTT TCTGGTAATT ACATCAAAAT AATTGGGTTT
AGAATTACTT CTACTCAACT CGGCTCTGGA ATCCATGTTG GTAATGGTAA CCACCATACG
AAAATTATCA ACAATGAAAT TCATGACTCT GGGTGTGGAG GAATTTCTGG TCAAGAGACG
GATTATCTTT ACATTGAAGG TAATATTGTT TATAGAAACG CATTCAAAGC ACCTTATCAA
TGTAGTGGCA TCTCCATTTA TCAAGCTAAA GCATTCGATA ATAAACCTGG ATTTCACAAT
ATCATTAGAG GCAATATATC TTACTTTAAT GAAAATAAAT TACCGAGAGA AAATGGTAAA
GTTACTGATG GTAACGGTAT TATCATTGAT GATTTTCGAC ATACTCAAGG TCAAGGGCAA
ACATCAAAAT ACACTGCTTG GACTTTGATA GAAAATAATA TCGTTTTTGA TAATGGTGGC
AGAGGGATTC ATGTTTTTCA AAGTGATAAT GTTGTTGTCC GAAACAATAC CACTTTTAAA
AATCTGAAAT CTGATAACTT GGAAGGCACT CTTAATGGAG AAATTAGTAC ATATTTTTCA
TCTAATGTGC ATTTTTATAA CAACATTGCC TACGCTGCAA ATAAGTCTAA AAAAACTTTT
GTAGATGATT ATTCTCAAAA TAACAAATGG GATTATAACT TGTCATACAA TGGCTCTATT
TTAATCAATG ATGGTCATTC TGATGCTAGT TTGGGCAAAA ATAATCTAAT TGACTTTAAT
CCTCTTTTTG TTAATCCATC TATTATTCAT GGTGTTGCCA ATTTTCGCTT GCAAGCCACA
AGTCCTGTGA TTGACGCAGG TACATCAATG AGTGCAGCTA GTAGTGATTT TAATGGTCAA
AAAAGACCTA TAGGTTCAGG ATATGATATT GGAGCCTATG AGTTCAAATA G
 
Protein sequence
MMRYKSLTWG VFTILIFGLT TIYVSKIVNA NNGDSINQEA IKNNYLWAEF EAQEFGRNGD 
VSQSLGTTYY VDQSLGNDSN PGTTENLAFK TIQKANQIIN EGDIVYVKNG TYDENITVTK
SGNPNNWIVF QAFPGHKPFV RGTQDGTFRV SGNYIKIIGF RITSTQLGSG IHVGNGNHHT
KIINNEIHDS GCGGISGQET DYLYIEGNIV YRNAFKAPYQ CSGISIYQAK AFDNKPGFHN
IIRGNISYFN ENKLPRENGK VTDGNGIIID DFRHTQGQGQ TSKYTAWTLI ENNIVFDNGG
RGIHVFQSDN VVVRNNTTFK NLKSDNLEGT LNGEISTYFS SNVHFYNNIA YAANKSKKTF
VDDYSQNNKW DYNLSYNGSI LINDGHSDAS LGKNNLIDFN PLFVNPSIIH GVANFRLQAT
SPVIDAGTSM SAASSDFNGQ KRPIGSGYDI GAYEFK