| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4842 |
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| Symbol | |
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| ID | 3679340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6094586 |
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| End bp | 6095887 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637720199 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_325334 |
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| Protein GI | 75911038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000342709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0564871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ATCTACTACT TGCAGAAAAA GCTTTTACAG TTCTGTCTCT ACTCCATTAT
TCAGGCGCTC CTCTAGTTGT GATTCTGTCA GGGGGAGCAA GTGAAGGTGA TGATTCAATA
GCGGCTCCTG ATTTTGCCTT AATTCAATTC ATATTTTTAA TAATTTACTT CATTACCTTT
GCCTTACTCG TCCTGCGTTG GAAAAAAGTA ATTCAATTAA TTAATAAAGA TTGGTATATA
TGGCTTTTAC TCCTAGTAGC TATATTTTCC ATATTTTGGT CTGATGTACC TGCAATGACA
CAAAGTCGCG TCATAGCTCT ATCAGGAACA CTTCTATTTC CTCTTTACTT AGCCAGTCGC
TACACTTTAA AAGAACAATT ACATTTACTA GCATGGACTT TCGGCATAGC GATCGTAGGT
AGCTTTTTAT TCGCTTTCGG CCTAAGAAAT TATGGTCGTA TGGCTGGAGT GCATTTTGGT
ACATGGCGAG GAATATATAA CCATAAAAAC GTTCTTGGTA AAGTCATGGC TCCCAGTGCC
ATGGTGTTCT TACTTCTGGC TCTTCAACCA GAAAAAAAGC GTTGGCTATT TTGGGGAGGA
TTCATAGCAT CGATCTGGCT AATTATTGCT TCAAAAGCAT CATCACCTCT TATCAATGTT
ATTACTTTAA GTCTTTCATT ATTTTTATTT CGGATTTTAA GGTGGCGATA TAACTTTATG
ATCCCCGCGT TAGTGGGAAT CACAACATTA AGTACCATTG CATATATATT AATGACTACT
AATGCTGAAG CTATAGCAGC ATTATTAGGC AAAGATTTAA CACTCACTGG ACGAACTAAT
TTTTGGCCTT TGATCATCGA TAAAATAGCT GAACGTCCTT GGTTTGGTTA TGGATATGGT
GCATTCTGGC TGGGCTGGAC TGGTCCTTCC GCCGATATTT GGTACTCCTC TGGCTGGAAA
CCACCAAATA GCCACAATGG TTACTTAGAC CTTTGCCTTG AATTGGGATT AGTAGGCTTA
TCACTATATG TAATTGATTA TTTACAAGGT CTACTCAAGG CATTAGCTTA TGTGAGGTCA
GTTAAAACAT CAGATGGATT TTGGCCAGGA GTTTTTCTTA TGTATGTTGT GTTGTCAAAT
CTCACAGAAA GTACATTACT TATCCAAAAT AATTTCTTTT TTGTGATTCA AATTTCTATA
TTACTATCAC TACGAATATG TGAAGAACAA AAAACAACTC ATTCCATGAT CAAGCATAAA
AAGAAGATTA ATTATTCACA GAAAACCTAC AAAATACCGT AA
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| Protein sequence | MKKYLLLAEK AFTVLSLLHY SGAPLVVILS GGASEGDDSI AAPDFALIQF IFLIIYFITF
ALLVLRWKKV IQLINKDWYI WLLLLVAIFS IFWSDVPAMT QSRVIALSGT LLFPLYLASR
YTLKEQLHLL AWTFGIAIVG SFLFAFGLRN YGRMAGVHFG TWRGIYNHKN VLGKVMAPSA
MVFLLLALQP EKKRWLFWGG FIASIWLIIA SKASSPLINV ITLSLSLFLF RILRWRYNFM
IPALVGITTL STIAYILMTT NAEAIAALLG KDLTLTGRTN FWPLIIDKIA ERPWFGYGYG
AFWLGWTGPS ADIWYSSGWK PPNSHNGYLD LCLELGLVGL SLYVIDYLQG LLKALAYVRS
VKTSDGFWPG VFLMYVVLSN LTESTLLIQN NFFFVIQISI LLSLRICEEQ KTTHSMIKHK
KKINYSQKTY KIP
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