Gene Ava_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4829 
Symbol 
ID3679405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6067133 
End bp6068233 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID637720186 
ProductABC transporter-like 
Protein accessionYP_325321 
Protein GI75911025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0222578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG TTCGTTTAGA AGATATCAAG CGTCGATTTA ACAACGTCAC CGCAATTGAG 
GACATCACCT TTGAAATTCC TGATGGTGAG TTTTGGGTTT TGGTGGGGCC TTCGGGTTGT
GGGAAGTCTA CAATTTTACG GACGATCGCT GGTTTAGAAA GTGCTACATC CGGTAATCTG
TTTATTGGCG ATCGCTTGGT CAATAATATC CCCGCAAGAG CGCGCGATGT GGCGATGGTG
TTCCAAAACT ATGCTCTTTA TCCCCACATG ACGGTGGCGG AAAATATCGC CTTTGGGTTA
AAGATGCGGA AAATTAACCC GAAAATTGTG CAAGAACGGG TGGTGGATGT GGCGCGATCG
CTTTCTTTGG ATCATTTGTT AGATCGCAAA CCCAAACAAC TTTCCGGGGG TCAGCAACAA
CGGGTAGCAC TAGGGAGAGC GATCGCTCGT GAACCACAGG TATTTTTATT AGATGAGCCT
TTGTCTAATT TAGATGCCCA ATTGCGAGAT GATACTAGGG CAGAATTAAA GCAGTTACAT
CAACAATTAG GCATTACAAC TATCTACGTT ACCCATGATC AAGTCGAGGC GATGACTTTG
GCTGATAAGA TTGTGGTGTT AAGTGGTGGA CGGATTCAAC AAATTGGCGA ACCTCAAGGG
ATTTATGCTC GTCCCGCTAA TCAAATGGTG GCAACTTTTT TAGGTAATCC ACCGATGAAT
ATTCTGCCTG CAACTTATCA ACTTGCAGGT TTTGATGTCA ATGGACAATT ACTCGCAATT
CCAGGGTTTC TCAGGGAGAA TTTACAACTG CGTCCGGGAC AACGGGTGAA TTTGGGTATT
CGTCCAGAAC ACATCTCAAT TAATTCTGAT GAAATCAACG CGCAGAATTC AGGATTGTTA
GTCGATGTCA AATTAGTTGA ACCTTTAGGA AGGGAAACAT TAGTTCGTGT GAGTTTACCC
GATTCCACAG TACTATTGAG TGTTCAATTG AGTGGAAATA TTCGTCTACA TCCAGGCGAT
CGCCTTTCTT TACAACTCGA TTTAAATCAG TTGTTTATTT TTGATCCTCA GACTGGTTAT
AGAATATCAC CTCAGGATTG A
 
Protein sequence
MAKVRLEDIK RRFNNVTAIE DITFEIPDGE FWVLVGPSGC GKSTILRTIA GLESATSGNL 
FIGDRLVNNI PARARDVAMV FQNYALYPHM TVAENIAFGL KMRKINPKIV QERVVDVARS
LSLDHLLDRK PKQLSGGQQQ RVALGRAIAR EPQVFLLDEP LSNLDAQLRD DTRAELKQLH
QQLGITTIYV THDQVEAMTL ADKIVVLSGG RIQQIGEPQG IYARPANQMV ATFLGNPPMN
ILPATYQLAG FDVNGQLLAI PGFLRENLQL RPGQRVNLGI RPEHISINSD EINAQNSGLL
VDVKLVEPLG RETLVRVSLP DSTVLLSVQL SGNIRLHPGD RLSLQLDLNQ LFIFDPQTGY
RISPQD