Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4813 |
Symbol | |
ID | 3679428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6047243 |
End bp | 6051676 |
Gene Length | 4434 bp |
Protein Length | 1477 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720170 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_325305 |
Protein GI | 75911009 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.974814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCT CACCCGAACC TCAACCCGCA AATCATAGCA CTCTATTTAG CTACCAAGTG GGCGGCAGTT TGCCCATCGA TAACCCTGCC TATGTAGAGC GACAGGCAGA TCGGGAACTG TATGAACGTT TAAAGGCGGG TGAGTATTGT TTCGTGTTTA ACTCGCGGCA AATGGGTAAA TCGAGTTTGC GAGTACGGGC AATGCAGAAA TTACAGCAGG ATGGGGTCGT CTGTGCTGTC ATCGATCCGC AAACGCGGGG TACGACTTTG CGCGAAGATC AATGGTATGC AGGGACAATC AAGCGGCTAA TTGGCGACCT CCACCTACAA GATAAAATAG ATTTCCCTGG GTGGTGGAAA CAACTAGATG GGCAATCTAT TTCTGTAGTT GAGCGTTTTT ATGAGTTTAT CGACCAGATT TTGCTACCCC AGACTACCCA AAATATCACT ATTTTTGTGG AAGAGGTTGA TAACCTCCTC AGTCTCAAAT TTGATACCGA TGGATTTTTC ATTCTGATTC GTTCTTTATA TGAAAGGCGG GCAGAAAAGC CAGATTATAC CCGCCTGACC TTTGCATTCT TGGGAGTAGC AACACCTTCT GACCTCATTC GCAGTAGGCG GAGTTCTTCC TTTAATATCG GCCATGCAGT AGAGATGAGC GGGTTTCAAC TGGCTGAGGC AGAACCGCTA CAGCAAGGTT TAATTGGTAA GGTCAGTGAT CCCCAGGCAG TAATGCAGTC TGTATTGACA TGGACAGGAG GACAACCATT TTTGACCCAG AAAGTGTTGA ATTTGGTTGT CCAGCAGGTC AATTCGTCCT TGTCACCCCA GGAATTGGTA GAACAAGTTG TCTGTGCCAA AGTGATCGAC AACTGGGAAA CCCAAGATGT ACCACCACAC CTAAAGACCA TTCGTGACAG AATTTTGCAA AGTGATGAAC AAGGGCGAGG GCGTTTGCTC GGTCTATATC AGCAGGTTTT AGATCAGGGA GGCATTGCTG CTGATGAAAG TTATGAGCAA ATGCAACTGC GTTTAACCGG CTTGGTAGTC AAACGGGACG GCAAACTCAA TGTTTACAAT CCCATTTATG CGGCAGTATT TAACCAGCAA TGGGTAGATA GGGCATTGGC GGATTTGCGT CCGTCTTTTT ATGCGGAAGC CATGAAAGCC TGGCAAGAAT CCGATGAGCA AAAACAGTCA TTTCTACTGC GGGGACAGGC GCTAGAAGAT GCCGAAGCCT GGGCAAAGGG TAAACGCCTC AGTGATGAAG ATGACAGATT TTTACGGGAA AGCCGCGAGG TAGAAAAGCA AGACATTGAC CGTAAACTAG AAGCGGAACG TCTAGCGCGG GAGACAGCAG AACAGGCAAA TCAAATCCTT TTGGAGGCAG AGCAGACAGC GAAGGGGAAA GTGAGAGTTG GTTCGATAAT TTTGGCAGGG ACACTAGTAG TTGCAGGGGT GGCGAGTGTC TGGGCAGGAA TATCTGTTAA TGATGCAAAT GTTAAGGTTG CCAATACACA AAAAGAAGCA AAAGAATTAA CGGACAAGGC CAATCAGAGG GTGAAAGAGG CAAATATTCA GGTTGCCAAT ACAAAGGAAG AAGCAAAAAA TCGAACGAAA AAAGCAGATG ATGATGTTCG ACTAGCTCTT GAGAATTTAG GGAAAATAAC TAAACAAGCA AAGATTGATA AAGAAACAGC AGCAAAAAGT CTGATTGAGG CACAAGTAAA GCAGAAGGAA GCAAATCGGA AAGTTGAGCA AGCTAAAAAA GATTTGGCAG CAGCGAAGGC AGAGCTTAAA AATGTAGACC GACAGTCGCA AGAAAAGGTG GCAGCAGCAC AGGCAAAAGT AACGGATGCA GAAGCTAAGG TAGCACAAGC AATTCAACTG CGCGAAAAAG CTGAAAAAGA AGCTAGGGAA GCTCAAGACA ATACGAGACT TGCACTGCAA GGTAATGCAC TAGAGCAGTC AGGAATTGTT GCAATGCAAC AGTTTGATTC TGAAGAGTTG AACTCTTTAA TAAAGTCCAT AAGAAGTGCG AGAAATCTAG AAAATTTAGT TAAAAATGGT ACCTCTTTAG AAAATTACCC AGCGTTTAGC CCCTTATTTG CATTACAAAA AATACTCGAC AAAATTTTTG AGGTAAACCA ACTTACAGGA CATCAGGGTT GGGTTAGGGG CATCCGCTTT AGTCCAAATG GAAGGCTTAT AGTCACTTCT GGTTCGGATG GTACAGTCCG GATTTGGGAT TATTTAGGAA AACAGCAAAT CGAATTTAAG GCTCACTGGG GCAGTATTTT AAGTGTAAAC TTTAGTCCAG ATAGTAAACT CATTGCCACA GCATCAGATG ATGGAATGGT TCGGATTTGG AATCTATTAG GAGAGATGTT ATCTGAATAT AAACATCAAA ATGTTATTCG TGATGTTGCT TTTAGTCCAG ATAGTAAATT CATTGTGACT GGAGGTGAAG ATGGTGATAT TAATTTGTGG AGTTTGCAAG AAAAGCAAAA GATAAAGAAT TGGATGGCAG AACAGGGTGC AATTTATAGT CTAAGTATTA GTTCAGATGG TCAATATATC GCTACGGCAG GAAAGGATAG GATAGCTAAA CTTTGGAATT TAGTAGGACA AAAGCTATCT GAATTTAAAA GTCCCAATGG TAGCTTTCGT AGTATAAGCT TTAGTCCCGA TGGAAGATTA TTAGCTACCG CAGGTGATGA TAGTAAAGCA AGACTTTGGA AACTATCAGG TGAACAACTT GCAGAATTTA AAGGTCATGT AGGATGGGTT AGAGATGTAA GTTTTAGCCC AGATGGAAAG TTATTAGCCA CAGCAGGTGA TGATGGCAAG GTGAGACTTT GGCATCTATC AGGCAAGCAG TTAATAGAAT TCAAGGGACA TCAAGGAGGG GTATTAAGTG TAAGATTCAG CCCAAATAAA AAACTTCTGG CTACAACGGG TACAGATAGT AATGCTAAAG TTTGGAGTTT AGCAGGAAAG CAACTTAATC CAGATGTGCT TTATTCTACT AGACCATTTT TGAAAAATAT AGAAGGGGAA AGTAGTAATG AATGTTTTTC TTTATATGCA CCTGGATTAT ATCCAGAGCG AGTTTCTTCT TCGCTTTTTG AAGATAATCA AGTTGGGAGA ATATCATTTG AGAATCGAAC AAGCAGAATT ATTAAGGTTA AGCTCTACCA TCCAGATGTA CCTGGAATAG CATTTGGGGA GTACCCTGTA GAAGCAAAAT CTATCTGGAC TTTCCCTCCA GAAGGGGAAG ATTATGGTTT TGGTAGTGAC TGGGGAATTC AGGCAGATAA CTCTAAAATC TGCGTTCTTG GGCGAGTTTC TAACTGGAAT CTTTCTAGTA ATAGTAAGAT TCCCCATATC TTTAAAACTT CATCAGACAG ATTCCCATTA GGAGATTCTT TTGAAAATCA GAATATAGTA AACAGCGTAT CTTTTAATCC GAGTGGACAA ATCCTGGCCA CTGCTGAACT CAATGGTATG GTAAGGTTTT GGGATCTCTC CAAAAAAGAA TTAAGTCGAT GGAAAGCGAA TAATTATGGT GGGATTGTCA ACATAAATTT TAGTTCAGAT GGAAAGTATG TTGCTACAGC AATCCCAGGT AAAGTTATAA TTTGGGATTT ATCAGGTAAG CCAATTGTTC AGTATAACAA TACATATCAC GTCAGTTTTA GTTATGATAA TCGCTATTTA GCGACAGTAT TACAAGCCAG TAATACCGAA CTTAGTAAAG TGCAGATTTG GAATTGGCAG AATCCATCTC AGAAACAGCC AATAAAAGAA TGGCCATTAT CTCCGTCAAA AGACAGAGAT GTTGGAGTTT ATAGCATGAA CTTTAGCCAA GATGGGCAGA AAATACTTAT TGCCGGTACT TTGCAAGTTA ATCGATATAG TATTGTGGAC AGCCCAGTTC AACTTAGAGA TATTTCCGGT AAGATGCTGG CTGAATTTAA GGGACATCGG GGGGGAGTAT TCAGCGCTAA CTTTAGTCCT GATCAAAAAC AGGTTTTGAC AGGAGGAATG GACGGTACAG TTAGGCTTTG GGATTTATCC GGTGTTCAAC AGAGTCAGTG GAAAGCTCAC AAGGGATGGG TGAGAAGTGT CATATTTATT GATAATCAAC GTATTGCTAC AGTGGGAGAT GATGGATTGG TCAAACTGTG GAGTCGTTCA GGACAACAAT TAGCTGAGTT TGCTGGTCAT CAGGGAAAAA TCAGTAGCAT AGCCTTCAGA GCAGTTGATC AAACTATTGT TACATCAGGT TATGACGGTA CAGTAAGAAC CTGGCATATT GACAACTTGA GCGAACTACT CAAAAAGGGT TGCGACTGGC TGCATGACTA TCTGTCCACA AATCCCAATG TAACAGAGAG CGATCGCCAA ATGTGCGGTA TTGTGAAACA CTAA
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Protein sequence | MTTSPEPQPA NHSTLFSYQV GGSLPIDNPA YVERQADREL YERLKAGEYC FVFNSRQMGK SSLRVRAMQK LQQDGVVCAV IDPQTRGTTL REDQWYAGTI KRLIGDLHLQ DKIDFPGWWK QLDGQSISVV ERFYEFIDQI LLPQTTQNIT IFVEEVDNLL SLKFDTDGFF ILIRSLYERR AEKPDYTRLT FAFLGVATPS DLIRSRRSSS FNIGHAVEMS GFQLAEAEPL QQGLIGKVSD PQAVMQSVLT WTGGQPFLTQ KVLNLVVQQV NSSLSPQELV EQVVCAKVID NWETQDVPPH LKTIRDRILQ SDEQGRGRLL GLYQQVLDQG GIAADESYEQ MQLRLTGLVV KRDGKLNVYN PIYAAVFNQQ WVDRALADLR PSFYAEAMKA WQESDEQKQS FLLRGQALED AEAWAKGKRL SDEDDRFLRE SREVEKQDID RKLEAERLAR ETAEQANQIL LEAEQTAKGK VRVGSIILAG TLVVAGVASV WAGISVNDAN VKVANTQKEA KELTDKANQR VKEANIQVAN TKEEAKNRTK KADDDVRLAL ENLGKITKQA KIDKETAAKS LIEAQVKQKE ANRKVEQAKK DLAAAKAELK NVDRQSQEKV AAAQAKVTDA EAKVAQAIQL REKAEKEARE AQDNTRLALQ GNALEQSGIV AMQQFDSEEL NSLIKSIRSA RNLENLVKNG TSLENYPAFS PLFALQKILD KIFEVNQLTG HQGWVRGIRF SPNGRLIVTS GSDGTVRIWD YLGKQQIEFK AHWGSILSVN FSPDSKLIAT ASDDGMVRIW NLLGEMLSEY KHQNVIRDVA FSPDSKFIVT GGEDGDINLW SLQEKQKIKN WMAEQGAIYS LSISSDGQYI ATAGKDRIAK LWNLVGQKLS EFKSPNGSFR SISFSPDGRL LATAGDDSKA RLWKLSGEQL AEFKGHVGWV RDVSFSPDGK LLATAGDDGK VRLWHLSGKQ LIEFKGHQGG VLSVRFSPNK KLLATTGTDS NAKVWSLAGK QLNPDVLYST RPFLKNIEGE SSNECFSLYA PGLYPERVSS SLFEDNQVGR ISFENRTSRI IKVKLYHPDV PGIAFGEYPV EAKSIWTFPP EGEDYGFGSD WGIQADNSKI CVLGRVSNWN LSSNSKIPHI FKTSSDRFPL GDSFENQNIV NSVSFNPSGQ ILATAELNGM VRFWDLSKKE LSRWKANNYG GIVNINFSSD GKYVATAIPG KVIIWDLSGK PIVQYNNTYH VSFSYDNRYL ATVLQASNTE LSKVQIWNWQ NPSQKQPIKE WPLSPSKDRD VGVYSMNFSQ DGQKILIAGT LQVNRYSIVD SPVQLRDISG KMLAEFKGHR GGVFSANFSP DQKQVLTGGM DGTVRLWDLS GVQQSQWKAH KGWVRSVIFI DNQRIATVGD DGLVKLWSRS GQQLAEFAGH QGKISSIAFR AVDQTIVTSG YDGTVRTWHI DNLSELLKKG CDWLHDYLST NPNVTESDRQ MCGIVKH
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