Gene Ava_4805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4805 
Symbol 
ID3679420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6035098 
End bp6036366 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content39% 
IMG OID637720162 
ProductK+ transporter Trk 
Protein accessionYP_325297 
Protein GI75911001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTT TCTCCACTAG CAATGGTAAT TGGAATAATC TGATTGTGGC TTTGTTTACC 
TCAACATCCG CAGTTTGCGT CACTGGTTTA TCAGTGGTTG ACCCTGGTAC TTACTTTTCC
TTTTGGGGAC AGTTGTTCAT TGCTTTGTTG GCGCAAATTG GTGGGTTAGG TTATATGACA
ACTACCACCT TTTTGATTCT GCTGATTGGG CGCAAATTTG ACCTACGGCA AAAAATCGCT
ATTCAACAAG CTTTAGACCG CCCCGGAATG AGTGGTAGCA CTCAAGTTAT TCGCTCAATT
ATTGCCACAA CGCTAATTTT TGAAATTACA GGTGTCTTTT TATTATTACC AGCTTTTGTC
CCTGATTATG GCTGGAATCA AGGACTATGG TTAGCTATAT TTCATAGTGT TAATGCCTGG
AATAATGCTG GCTTTAGTCT GTTTAAAGAT AATCTAATCG GTTATCAATC CTCATTTTTA
GTAGTTTTCA CAGTTACAGG ATTAATTATC TTTGGTGGAA TTGGTTATCA GGTAATTTTA
GAAACTTACA TTTGGTTACG CGATCGCATC CTCAAGAAAA AAGAAACTTT GGTATTTTCA
TTAGACTTTA AAGTTGCAAC TAGCACTACA CTAATACTTT TATTTCTAGG CACAATCGCC
TTCTTTTGCA TAGAAGTAAG AAACCCAGCA ACCTTTGGTT CACTTAATTT ACGCGATCAA
TTTTTAGTAG CTTGGTTTCA GTCAGTGACT CCTAGAACTG CTGGCTTTAA CACCATCGAC
ATTGGCAAAA TGACAACTGC GGGTCTATTT ATCACCATTG CCCTGATGTT TATCGGTGCA
AGTCCAGGCG GTACCGGAGG AGGAATGAAA ACCACCACAC TGAGAGTTTT AACTAGCTGT
ACTAAAACGA TTCTTCAAGG TAAAGAAGAA GTTTTATTAT ATGAACGTAA AATAGCAGTT
GCTCTCATCT TAAAAGCAGT TGGTGTTTTA GTTGGTTCTA TAGCAACCGT CATTTTAGCC
ACAATTGTCA TATCTCTTAC AGACCCACAA CTAGATTTTA TTCAAATTCT ATTTGAAGTA
GTATCAGCCT TCGCCACTGT AGGTCTTTCA ACTGGTATTA CAGCTAGCGT CTCCCCAGCA
GCAAAACTAG TTTTAATTAT CACCATGTAT GTAGGTAGAG TAGGAGTTTT ACTACTAATG
TCTGCTATAT TAGGAGATCC GCGACCGACA AGGATTCACT ACCCTGAAGA AAACTTACTT
GTAGGGTAA
 
Protein sequence
MMPFSTSNGN WNNLIVALFT STSAVCVTGL SVVDPGTYFS FWGQLFIALL AQIGGLGYMT 
TTTFLILLIG RKFDLRQKIA IQQALDRPGM SGSTQVIRSI IATTLIFEIT GVFLLLPAFV
PDYGWNQGLW LAIFHSVNAW NNAGFSLFKD NLIGYQSSFL VVFTVTGLII FGGIGYQVIL
ETYIWLRDRI LKKKETLVFS LDFKVATSTT LILLFLGTIA FFCIEVRNPA TFGSLNLRDQ
FLVAWFQSVT PRTAGFNTID IGKMTTAGLF ITIALMFIGA SPGGTGGGMK TTTLRVLTSC
TKTILQGKEE VLLYERKIAV ALILKAVGVL VGSIATVILA TIVISLTDPQ LDFIQILFEV
VSAFATVGLS TGITASVSPA AKLVLIITMY VGRVGVLLLM SAILGDPRPT RIHYPEENLL
VG