Gene Ava_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4804 
Symbol 
ID3679419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6034230 
End bp6034925 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content41% 
IMG OID637720161 
ProductTrkA-N 
Protein accessionYP_325296 
Protein GI75911000 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTGT CATCGCTAGG TTTTTTTCGC AGTTTACGCA AAGATAATAA CCAATTTGCT 
GTAATTGGCT TGGGTCGTTT TGGTCGTTCT GTCTGTTCAA CACTGCATAA GTTAGGCTAT
CAAGTGCTAG CAACAGATAT AGATGAAAAA CGAGTGTCAG CAGCGTTGAC GGAAGAAATT
GTTGGTCATG CTTTACAACT AGATTCAACC GAAACAGCCG CCCTTAAGGA AGCGGGTATT
CTGGAATTTG ATACAGTAAT TGTGGCAATT GGTAACTATG TTCAAGAAAG CGTAATCACC
ACTTTAAATG TCAAGGAAGC TGGAGTACCT CACGTTGTTG CTAAAGCTTC CAGTGAAGTC
CATTACAAGC TATTAAAGCG GGTTGGTGCA GATCATGTTG TTTTTCCTGA ATATGAGGCG
GGTTGTGCCT TAGCACGGAC ACTGACGAAG CCATCAATTC TTGATAGATT CGACCTCGAT
CCAGATAACA GTATTGTAGA GTTAATTGTG CCAGATGAAT TTCACGGGAG AACTATCGCA
GAATTGCAGT TACGCAATCG TTACGGGTTG AATTTATTAG CCGTTAGTCA AGATGGTAAA
TTTCAAATTA ACCCTAACCC CGGTAAACGT TTAGAACGTG GTACGGCAAT GGTGGTTATA
GGTTGTGATA GAGATATTAA TCGTTTGCCG ATTTAA
 
Protein sequence
MNLSSLGFFR SLRKDNNQFA VIGLGRFGRS VCSTLHKLGY QVLATDIDEK RVSAALTEEI 
VGHALQLDST ETAALKEAGI LEFDTVIVAI GNYVQESVIT TLNVKEAGVP HVVAKASSEV
HYKLLKRVGA DHVVFPEYEA GCALARTLTK PSILDRFDLD PDNSIVELIV PDEFHGRTIA
ELQLRNRYGL NLLAVSQDGK FQINPNPGKR LERGTAMVVI GCDRDINRLP I