Gene Ava_4803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4803 
Symbol 
ID3679418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6032895 
End bp6033917 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID637720160 
Producttetratricopeptide TPR_3 
Protein accessionYP_325295 
Protein GI75910999 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATT TACCAGGAAG CAAGTTGTTG GCACAAACTC CCATCTCGCG GGATTTGGAA 
ACAGCTAGTC TTTACCAACA GGGCGTTACA CGCTACAACC GTAGCGACTG GCAAGGTGCA
GAAAACGCTT TTCGCCAAGC GTTGCAGCGA GAACCCAATT TAGCAATGGC TAGAGCTTAT
CTAGGAAATA TTTACCTGAT GCAAAACCGT CTAGATGTGG CGGTTCAGGA ATATGGGGAA
GCGATTAGAC TTAACCCAAA TTTGGGAGAA ACTTATTACA ACCTGGGTTT AGCATTGCAA
CAACAGGGAA AAAAAGAGGG TGCTATTACA GCTTATCGCC AAGCTTTAGT GATAGACCCA
AGAAGGGTGG AGGCTTATTA TAACTTGGGT TTGGTATTAT ACGAACAAGG ATTATTGCAG
GAAGCGATCG CGGCTTACCA AGATGCAATT AATCTTGAAC CCAGTAAAGT CAATGCTCAT
CATAATTTAG CGATCGCCCT GCAACAAACA GGTAAAATGG AAGAGGCGAT CGTCGCCTAT
AGAGAAGTTT TGAAGTTAGA TCCTCAAAAT GCGGCAGCTT ACAGTAATTT AGGCAGCCTG
ATGGCGATGC AAGGACGACC AGAGGAAGCC ATAGCCGCTT ATACCCAAGC TGTTCGCCAA
GACCCCAAAA ATGCCCTAGC TTACTATAAC TTGGGAATAA CTTTATATAA CCAGGGCGAC
CTGCAAAAAG CTAGTAACGC CTTCAAACGC GCTCAGGAAG AATACAGCCA ACAAGGGAAC
CTGGAGCAAA CAGAGAAGAC CGAGCAGTTA ATGCAGCAAG TTGCTCAGAA AATCGAGGAG
CAAAAGCTGC AACAAAGACA AGCATCCACA CCCAAGCCGA CAGACAACGC TACAAACAAC
CTCTTAGAAA AACTAACTCA ACTAACAGCA CCAAAAGAAC AACCAGCTAA TTCTGGTGCA
GTAACTGTCT CGGATGAACA AAAGCAGTTT CCACCAATAT TTCCTAATAC CAATTCTCGA
TAA
 
Protein sequence
MVNLPGSKLL AQTPISRDLE TASLYQQGVT RYNRSDWQGA ENAFRQALQR EPNLAMARAY 
LGNIYLMQNR LDVAVQEYGE AIRLNPNLGE TYYNLGLALQ QQGKKEGAIT AYRQALVIDP
RRVEAYYNLG LVLYEQGLLQ EAIAAYQDAI NLEPSKVNAH HNLAIALQQT GKMEEAIVAY
REVLKLDPQN AAAYSNLGSL MAMQGRPEEA IAAYTQAVRQ DPKNALAYYN LGITLYNQGD
LQKASNAFKR AQEEYSQQGN LEQTEKTEQL MQQVAQKIEE QKLQQRQAST PKPTDNATNN
LLEKLTQLTA PKEQPANSGA VTVSDEQKQF PPIFPNTNSR