Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4797 |
Symbol | |
ID | 3679412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6028121 |
End bp | 6028954 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720154 |
Product | polysaccharide deacetylase |
Protein accession | YP_325289 |
Protein GI | 75910993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACA ACCACCTGAA AACAGAAAAA TCTCTTGGCG TGATGGCGAT CGCCACTTTT TTGGTAACTG GTGCTATTAC AGTGGTTACT CTCTTAGCCT TCCGCAAAAA CCAACCTCTA ATAGTCACCC AAGATTTACC CGTTCCTCCC AATCAAACCC AATCGCCGCC ACCACCTAAA TTAGACAAGC TGACCTTTAC TGTACCGATT CAATATCAAG GGAAAACAGT TTATCGGGTA CAAACCAATA GTAACGAGAA AGTGATTTCT CTTACCTTTG ATGATGGGCC GTGGCAAAAA ACCACGCCAG AAATTTTGGA GATTCTCAAA CAAAATCAAA TTAAAGCGAC ATTCTTTTGG GTAGGACAAG CTATACAAGC AAATCCAGAC ATAGCTAAAC GAGTTGTAGC TGAAGGTCAC GCTATTGGTA ATCATACTTG GCATCATTGG TATAGACGCA TGAATGAGGA CACAGCCAAG AGCGAAATTG AACGCACATC TGACCTAATC TACAAAACTA CCGGGGTAAA AACTCATTTA TTCCGTCCCC CTGGAGGAGT TTTAAACAAT GGATTAGCCG CTTATGCTAA AAGTCAGAAA AATGCTGTGG TCATGTGGTC TTTGACTTCA GCCGACACAG ACCCCCGCGC TAAACCTGAA GTATTTGTGA AAAACGTTGT CAAAGGCGCA AAACCTGGTT ACATAGTTTT GATGCACGAT GGTGGAGGCG ATCGTCAAAG AACAGTAAAA GCCCTACCAC AGATTATTAG TGGACTGAAA CAGCAAGGTT ATAAATTTGT GACAGTTCCC GAATTATTAG AAATGAAGCC GTAG
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Protein sequence | MTNNHLKTEK SLGVMAIATF LVTGAITVVT LLAFRKNQPL IVTQDLPVPP NQTQSPPPPK LDKLTFTVPI QYQGKTVYRV QTNSNEKVIS LTFDDGPWQK TTPEILEILK QNQIKATFFW VGQAIQANPD IAKRVVAEGH AIGNHTWHHW YRRMNEDTAK SEIERTSDLI YKTTGVKTHL FRPPGGVLNN GLAAYAKSQK NAVVMWSLTS ADTDPRAKPE VFVKNVVKGA KPGYIVLMHD GGGDRQRTVK ALPQIISGLK QQGYKFVTVP ELLEMKP
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