Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4777 |
Symbol | |
ID | 3679430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6005184 |
End bp | 6005828 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637720133 |
Product | Allergen V5/Tpx-1 related |
Protein accession | YP_325269 |
Protein GI | 75910973 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.497987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC TGAAGAATAA ATTGCAATTT TGGAAGTCTG TTCCCGAAGC ATCACAAAAA AGCTGGGAAA TCTCACCACC AAAATCTACT CTCTCACCCC TAGAACAACG AGTGGTAGAG GAGATGAATA AAGTACGGAC AAATCCCCAA GCATACTTAC CAATTTTGCA AAGTTACCGC CAGCGCTTTC AGGGGAACAA AGTTAAGTTG GCTAATTACG TTTATTTGCA AACTCAGGAA GGGGTAAAAG CCGTAGATGA GGCGATCGCT TTTCTCAAGT CAATCCATCC TGTGGGAACA TTAAGCGTAT CTGTGGGTAT GTCTTCGGCT GCAAGAGATC ACGTCAAAGA CCAAGGGAAA ACAGGTGCTA CAGGACATTA TGGCAGCGAT AGCAGCGATC CTTTCACTAG ACTAAACCGC TATGGTAATT GGCTAGTCAC CGCAGGCGAA AACATTAGCT ACGGTTCCAA CACCGCCCAA GATATTATCA TGCAGTTAAT TATTGATGAT GGTGTACCGT CACGCGGTCA TCGCACCAAT ATATTTAACC CTGCATTTAA AATTACAGGC GTAGCCTTTG GGATTCACGC CAGTTACAGA CAAATATGTG TGATTACCTA TGCAGGCGGT TATACAGACC AATAA
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Protein sequence | MKLLKNKLQF WKSVPEASQK SWEISPPKST LSPLEQRVVE EMNKVRTNPQ AYLPILQSYR QRFQGNKVKL ANYVYLQTQE GVKAVDEAIA FLKSIHPVGT LSVSVGMSSA ARDHVKDQGK TGATGHYGSD SSDPFTRLNR YGNWLVTAGE NISYGSNTAQ DIIMQLIIDD GVPSRGHRTN IFNPAFKITG VAFGIHASYR QICVITYAGG YTDQ
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