Gene Ava_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4777 
Symbol 
ID3679430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6005184 
End bp6005828 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID637720133 
ProductAllergen V5/Tpx-1 related 
Protein accessionYP_325269 
Protein GI75910973 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.497987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TGAAGAATAA ATTGCAATTT TGGAAGTCTG TTCCCGAAGC ATCACAAAAA 
AGCTGGGAAA TCTCACCACC AAAATCTACT CTCTCACCCC TAGAACAACG AGTGGTAGAG
GAGATGAATA AAGTACGGAC AAATCCCCAA GCATACTTAC CAATTTTGCA AAGTTACCGC
CAGCGCTTTC AGGGGAACAA AGTTAAGTTG GCTAATTACG TTTATTTGCA AACTCAGGAA
GGGGTAAAAG CCGTAGATGA GGCGATCGCT TTTCTCAAGT CAATCCATCC TGTGGGAACA
TTAAGCGTAT CTGTGGGTAT GTCTTCGGCT GCAAGAGATC ACGTCAAAGA CCAAGGGAAA
ACAGGTGCTA CAGGACATTA TGGCAGCGAT AGCAGCGATC CTTTCACTAG ACTAAACCGC
TATGGTAATT GGCTAGTCAC CGCAGGCGAA AACATTAGCT ACGGTTCCAA CACCGCCCAA
GATATTATCA TGCAGTTAAT TATTGATGAT GGTGTACCGT CACGCGGTCA TCGCACCAAT
ATATTTAACC CTGCATTTAA AATTACAGGC GTAGCCTTTG GGATTCACGC CAGTTACAGA
CAAATATGTG TGATTACCTA TGCAGGCGGT TATACAGACC AATAA
 
Protein sequence
MKLLKNKLQF WKSVPEASQK SWEISPPKST LSPLEQRVVE EMNKVRTNPQ AYLPILQSYR 
QRFQGNKVKL ANYVYLQTQE GVKAVDEAIA FLKSIHPVGT LSVSVGMSSA ARDHVKDQGK
TGATGHYGSD SSDPFTRLNR YGNWLVTAGE NISYGSNTAQ DIIMQLIIDD GVPSRGHRTN
IFNPAFKITG VAFGIHASYR QICVITYAGG YTDQ