Gene Ava_4775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4775 
SymbolglgA 
ID3679506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6002332 
End bp6003750 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content46% 
IMG OID637720131 
Productglycogen synthase 
Protein accessionYP_325267 
Protein GI75910971 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.385965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTC TATTTGTGGC AGCAGAAGCA GCACCCATCG CAAAAGTAGG AGGGATGGGT 
GATGTTGTCG GTGCATTACC TAAGGTCTTG AGAAAAATGG GGCATGATGT GCGTATCTTC
TTGCCCTATT ACGGCTTTTT GCCAGACAAA ATGGAAATTC CCAAAGATCC AATCTGGAAG
GGATACGCCA TGTTTCAGGA CTTTACAGTT CACGAAGCAG TTCTGCCTGG TACTGATGTT
CCCTTGTATT TATTTGGACA TCCAGCCTTC AACCCCCGGC GAATTTATTC GGGAGATGAT
GAAGACTGGC GGTTCACCTT GTTTTCCAAT GGTGCGGCGG AATTTTGTTG GAATTACTGG
AAACCAGAAA TTATTCACTG TCACGATTGG CACACAGGCA TGATTCCTGT GTGGATGAAC
CAATCACCAG ATATCACCAC AGTCTTCACT ATCCACAACC TAGCTTACCA AGGGCCTTGG
CGTTGGTATC TAGATAAAAT TACTTGGTGT CCTTGGTATA TGCAGGGACA CAACACAATG
GCGGCGGCTG TCCAGTTTGC TGACAGAGTA AATACCGTTT CTCCTACATA CGCCGAGCAA
ATCAAGACCC CGGCTTACGG TGAGAAAATA GAAGGCTTGC TGTCTTTCAT CAGTGGTAAA
TTATCTGGGA TTGTTAACGG TATAGATACG GAAGTTTATG ACCCAGCTAA TGATAAATTT
ATTGCTCAAA CTTTTACTGC TGATACTTTA GATAAACGCA AAGCCAACAA AATTGCTTTA
CAAGAAGAAG TAGGGTTAGA AGTTAACAGC AATGCCTTTT TAATTGGCAT GGTGACAAGG
TTAGTCGAGC AGAAGGGTTT AGATTTAGTC ATCCAAATGC TCGATCGCTT TATGGCTTAT
ACTGATGCTC AGTTCGTCTT GTTAGGAACA GGCGATCGCT ACTACGAAAC TCAAATGTGG
CAATTAGCAT CCCGCTACCC CGGACGTATG GCCACCTATC TCCTATACAA TGATGCCCTA
TCCCGCCGCA TCTACGCCGG TTCTGATGCC TTTTTAATGC CCAGCCGCTT TGAACCATGC
GGTATTAGCC AGATGATGGC TTTACGCTAC GGTTCCATCC CCATCGTTCG CCGCACTGGG
GGTTTAGTTG ACACCGTATC CCACCACGAC CCCGTAAACG AAGCCGGTAC AGGCTACTGC
TTTGACCGCT ACGAACCCCT AGACTTATTC ACCTGCATGA TTCGCGCCTG GGAAGGCTTC
CGCTACAAAC CCCAATGGCA AGAACTACAA AAGCGTGGTA TGAGTCAAGA CTTCAGCTGG
TACAAATCCG CTAAGGAATA CGACAGACTC TATCGCTCAA TATACGGTTT GCCAGAAGCA
GAAGAGACAC AGCCAGAGTT AATTCTGGCA AATCAGTAG
 
Protein sequence
MRILFVAAEA APIAKVGGMG DVVGALPKVL RKMGHDVRIF LPYYGFLPDK MEIPKDPIWK 
GYAMFQDFTV HEAVLPGTDV PLYLFGHPAF NPRRIYSGDD EDWRFTLFSN GAAEFCWNYW
KPEIIHCHDW HTGMIPVWMN QSPDITTVFT IHNLAYQGPW RWYLDKITWC PWYMQGHNTM
AAAVQFADRV NTVSPTYAEQ IKTPAYGEKI EGLLSFISGK LSGIVNGIDT EVYDPANDKF
IAQTFTADTL DKRKANKIAL QEEVGLEVNS NAFLIGMVTR LVEQKGLDLV IQMLDRFMAY
TDAQFVLLGT GDRYYETQMW QLASRYPGRM ATYLLYNDAL SRRIYAGSDA FLMPSRFEPC
GISQMMALRY GSIPIVRRTG GLVDTVSHHD PVNEAGTGYC FDRYEPLDLF TCMIRAWEGF
RYKPQWQELQ KRGMSQDFSW YKSAKEYDRL YRSIYGLPEA EETQPELILA NQ