Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4759 |
Symbol | |
ID | 3679490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5985969 |
End bp | 5986634 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637720115 |
Product | nitroreductase |
Protein accession | YP_325251 |
Protein GI | 75910955 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000691202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCA TCACCCAAAT TCAACCGCTA GATGTACCCA GCGCTATAGT TCAACGTCGC TCGATTAAAA CTTTTAAAAC AGACCCCATT GCCCCAGAAT TACTCAAACA ACTAGTAGAC TTGACTGTAG CCGCACCCAG TAGCTTTAAC ATTCAAGATT GGCGAATTAT TTTAGTTCAA GATGAGGCGC AAAAAGCAGC CCTTTCTGCC GCCTCTTGGA ACCAAAAACA AATTATCGAA GCACCTGTAA CTTTTGTTTT CGCTGCCGAT TCCAGCGTCG GCGAAGGAGA CTTAACCCCG GTTTTTGAAA CAGCGTTAGC CACTGGGGCT TGGAATGAAG GGACTGTGAA TTATTTTAAA AATGCTATTC CCCAATTTCA AGCAGGACTG GGAGATAAGC GCCGGGAATA TGCGATTAAA GATGCCATTA TTGCTGCTAC CCATTTGGTA TTAGCAGCAG AAAGTTTAGG CTTATCCACC TGCTTTATGA ACGGCTGGAT TGAAGACCAA GTGAAAGAAG TAATTGGTGC GGCGGATAAT CCTGATTTAG CGATCGCTGT TTTAGTTCCT GTAGGCTATG CAGCAGAACC ACGTTTAAAT CCAGGTCGTC TGCCATTGTC TAACAATGTC TCTGTAGACA GAATTGATAA TCCCTATGTA GGTTAG
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Protein sequence | MSTITQIQPL DVPSAIVQRR SIKTFKTDPI APELLKQLVD LTVAAPSSFN IQDWRIILVQ DEAQKAALSA ASWNQKQIIE APVTFVFAAD SSVGEGDLTP VFETALATGA WNEGTVNYFK NAIPQFQAGL GDKRREYAIK DAIIAATHLV LAAESLGLST CFMNGWIEDQ VKEVIGAADN PDLAIAVLVP VGYAAEPRLN PGRLPLSNNV SVDRIDNPYV G
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