Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4756 |
Symbol | |
ID | 3679643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5982559 |
End bp | 5983560 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720112 |
Product | peptidase M23B |
Protein accession | YP_325248 |
Protein GI | 75910952 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0919319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTAA AACTAGCCAA AAAAAATACT ATCCTTCGCT GCTTTAGTTA TGTATGTATT ACTTTAGCCT CTTTAATTGC AGTCCCCAGT ACAAATACTA GTGCCTCAAC TCAAGTAGCA GGTAATTCTC AAATTCCACA AAAACCTATA GCCATTCCTA TTCCAACTCT TAGTACTAAC TTGATTTGGC CTACGCAAGG ATATATTTCC CAAGGCTTTC GCAAATATCA ACATGAAGGA ATTGATATTG CCGGCCCATC TGGAACACCC ATTTTCGCGG CGGCGACTGG GAAAGTGGTT AAAGCCGGAT GGGATGAATG GGGACTAGGT AATGCTATCG AAATTAAACA TCCCAATGGT AGCGTCACTG TTTACGGACA TAATCGCCGT TTGTTAGCCA GCAAAGGTCA ACAAGTGAGA CAAGGACAAA TCATCGCGGA AATGGGGTCT ACAGGTAATA GTACTGCACC ACATTTACAC TTTGAATATT ATCCCAATGG GAAAGTAGCG GTTAACCCAA TGACTGTTTT AGCATCTGCT ACCGCCAACA AAATTCCCTC ACAACCTGTT GCTAGTAATA CTGCTAAAGT TAATCAAATC AGGCGAGTAC GGGAAAATCC CCCAAGCAAA CCTGAAAATA ATTCTTCCCC TACTCCCTCC ATCCCCATCC CCATAGAACA GCCAGTTTCA CCCGCACAAA ACATTCCCGT AGCCTTTGCA CCAATAGTTA CTGATACGGG ATGCAGTGGT TTAACGCTGC TTGAAGGTGA GACAAAAAAC ATAGTAGTCC GAGTCTGCAA CGAAAATGGG CAATTGTTTT ATATTGGTGA GTTGAAACAA AATCCAACCC AACCCGTCAA AATACCAGCT TGGAGTATTG GTAAAGATAG ATATCAGGCA GATAATGGTA GTTTCTCTTA CGTAGTTAGT CCGGAACAAG TGGAAATTTG GCGTAATGGT AGTCAGATAC GTACCGATAG TTTTTATACT TCTAATAAAT AA
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Protein sequence | MLLKLAKKNT ILRCFSYVCI TLASLIAVPS TNTSASTQVA GNSQIPQKPI AIPIPTLSTN LIWPTQGYIS QGFRKYQHEG IDIAGPSGTP IFAAATGKVV KAGWDEWGLG NAIEIKHPNG SVTVYGHNRR LLASKGQQVR QGQIIAEMGS TGNSTAPHLH FEYYPNGKVA VNPMTVLASA TANKIPSQPV ASNTAKVNQI RRVRENPPSK PENNSSPTPS IPIPIEQPVS PAQNIPVAFA PIVTDTGCSG LTLLEGETKN IVVRVCNENG QLFYIGELKQ NPTQPVKIPA WSIGKDRYQA DNGSFSYVVS PEQVEIWRNG SQIRTDSFYT SNK
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