Gene Ava_4756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4756 
Symbol 
ID3679643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5982559 
End bp5983560 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content42% 
IMG OID637720112 
Productpeptidase M23B 
Protein accessionYP_325248 
Protein GI75910952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0919319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTAA AACTAGCCAA AAAAAATACT ATCCTTCGCT GCTTTAGTTA TGTATGTATT 
ACTTTAGCCT CTTTAATTGC AGTCCCCAGT ACAAATACTA GTGCCTCAAC TCAAGTAGCA
GGTAATTCTC AAATTCCACA AAAACCTATA GCCATTCCTA TTCCAACTCT TAGTACTAAC
TTGATTTGGC CTACGCAAGG ATATATTTCC CAAGGCTTTC GCAAATATCA ACATGAAGGA
ATTGATATTG CCGGCCCATC TGGAACACCC ATTTTCGCGG CGGCGACTGG GAAAGTGGTT
AAAGCCGGAT GGGATGAATG GGGACTAGGT AATGCTATCG AAATTAAACA TCCCAATGGT
AGCGTCACTG TTTACGGACA TAATCGCCGT TTGTTAGCCA GCAAAGGTCA ACAAGTGAGA
CAAGGACAAA TCATCGCGGA AATGGGGTCT ACAGGTAATA GTACTGCACC ACATTTACAC
TTTGAATATT ATCCCAATGG GAAAGTAGCG GTTAACCCAA TGACTGTTTT AGCATCTGCT
ACCGCCAACA AAATTCCCTC ACAACCTGTT GCTAGTAATA CTGCTAAAGT TAATCAAATC
AGGCGAGTAC GGGAAAATCC CCCAAGCAAA CCTGAAAATA ATTCTTCCCC TACTCCCTCC
ATCCCCATCC CCATAGAACA GCCAGTTTCA CCCGCACAAA ACATTCCCGT AGCCTTTGCA
CCAATAGTTA CTGATACGGG ATGCAGTGGT TTAACGCTGC TTGAAGGTGA GACAAAAAAC
ATAGTAGTCC GAGTCTGCAA CGAAAATGGG CAATTGTTTT ATATTGGTGA GTTGAAACAA
AATCCAACCC AACCCGTCAA AATACCAGCT TGGAGTATTG GTAAAGATAG ATATCAGGCA
GATAATGGTA GTTTCTCTTA CGTAGTTAGT CCGGAACAAG TGGAAATTTG GCGTAATGGT
AGTCAGATAC GTACCGATAG TTTTTATACT TCTAATAAAT AA
 
Protein sequence
MLLKLAKKNT ILRCFSYVCI TLASLIAVPS TNTSASTQVA GNSQIPQKPI AIPIPTLSTN 
LIWPTQGYIS QGFRKYQHEG IDIAGPSGTP IFAAATGKVV KAGWDEWGLG NAIEIKHPNG
SVTVYGHNRR LLASKGQQVR QGQIIAEMGS TGNSTAPHLH FEYYPNGKVA VNPMTVLASA
TANKIPSQPV ASNTAKVNQI RRVRENPPSK PENNSSPTPS IPIPIEQPVS PAQNIPVAFA
PIVTDTGCSG LTLLEGETKN IVVRVCNENG QLFYIGELKQ NPTQPVKIPA WSIGKDRYQA
DNGSFSYVVS PEQVEIWRNG SQIRTDSFYT SNK