Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4743 |
Symbol | |
ID | 3679630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5951535 |
End bp | 5953103 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637720099 |
Product | transposase IS4 |
Protein accession | YP_325235 |
Protein GI | 75910939 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC GGGATGAAAT AGGAGTGTTA TATAAGGATG AGGATTTTGT CAAACTTTAC CGCGCAGATT GTGGTCAAAG TGGAATATCA GCAGGACAAC TGGCATTAGT GACAGTAATG CAATTTATCG AAGGTTTAAC GGATAGACAA GCGGCGGATG CAGTGAGGGG TCATATTGAT TGGAAATACG CACTATCGTT GGAATTAAAT GACCCAGGGT TTGATTATTC AGTACTTTCA GAATTTCGTC AGCGATTAAT CAAAGCAGGA CGAGAGCGAG AGTTACTCAA CCAAATGCTA GCTCGTTTCC AAGAACTAGG TTGGCTCAAA AATCGCGGCC GTGTCAGAAC TGATTCAACT CACGTATTAG CCGCAGTACG ACAGTTAAAT CGTTTGGAAT TAGTGGGAGA AACTTTACGT CATACCTTAA ATGACTTGGC TTATTTTGCC CCTGATTGGC TCAAATCGAG AGTTGACGTT GATTGGTTTG AACGTTACTC CCTGAGATTT GAGCAATACC GCTTGCCCAA ATCAAAAGCC GAACGTGAGA AATTGAGGCG AAAAATTGGT GAGGATGGTC ATCATTTGCT ATCCGCTTTG TATGCAGACT CAACTTGTAA TTGGCTGTGG CAGATTCCAT CAGTGGAAAC ATTACGTATA GTTTGGGTGC AACAATACTA TATTCAATTG CAACAAGTCT ATTGGCGAGA ACAAGATAAC TTACCACCAA ATAGACTACA GATTGAATCT CCTTACGATG TTGATGCACG CAATTCCAGC AAGCGAGAAA TCAACTGGAC TGGTTATAAT CTGCATCTGA CAGAAATTTG TCACCCCATA CTGCCAAACT TAATTATCAA TGTGGAAACG TCCGTGGCCA CAAGTGCGGA TGTTGAGATG ACACCAGTAA TTCATTCTCG TTTAAACCAG AACAATCTTT TGCCACAAGA ACATGTTGTC GATACTGGCT ATGTCAATGC TCAAAACTTA GTCGATAGTC AATCCCATTT TCATGTTGAT TTAGTAGGAA AAGTTCCCCC CGGAACTAGT TGGCAAGCAA CAGCACAATC CGGCTTTGAG CAAAATTGCT TCACTATTCA TTGGGATTTG ATGCGTGTTG ATTGCCCAAT GGGTAAACAA AGTAAGTCCT GGCGTACAAC TGTCGATAGC CATGACAATC CAGTAGTCAA AATACAATTT GACAAATCCG ATTGTTCGCT TTGTTCAAGT CGCTCAAAAT GCACTCGCTC CAAAAAACTA CCGCGTCTTC TGACCCTCAA ACCACAGGAA CTACATCTTG CATTACATGA TGCTCGCATT CGCCAAAAAA CTGAATCTTT TCAACAAATT TATCACCAAC GTGCTGGCGT TGAAGGCTTG ATTTCCCAAG CTACTGGTCG CTACCAATTA CGCCGTTGTC GCTACATTGG TCTTGCCAAA ACTCTCTTGC AGCATGTCAT TACTGCTGCT GCTATCAACT TCAGTCGGAT GTGGGATTGG TGGCAACATG TCCCACGCAG TCAGACTCGC GTTTCTCACT TTGCTCGAAT TGCTCCCACT GCCTCATAG
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Protein sequence | MKMRDEIGVL YKDEDFVKLY RADCGQSGIS AGQLALVTVM QFIEGLTDRQ AADAVRGHID WKYALSLELN DPGFDYSVLS EFRQRLIKAG RERELLNQML ARFQELGWLK NRGRVRTDST HVLAAVRQLN RLELVGETLR HTLNDLAYFA PDWLKSRVDV DWFERYSLRF EQYRLPKSKA EREKLRRKIG EDGHHLLSAL YADSTCNWLW QIPSVETLRI VWVQQYYIQL QQVYWREQDN LPPNRLQIES PYDVDARNSS KREINWTGYN LHLTEICHPI LPNLIINVET SVATSADVEM TPVIHSRLNQ NNLLPQEHVV DTGYVNAQNL VDSQSHFHVD LVGKVPPGTS WQATAQSGFE QNCFTIHWDL MRVDCPMGKQ SKSWRTTVDS HDNPVVKIQF DKSDCSLCSS RSKCTRSKKL PRLLTLKPQE LHLALHDARI RQKTESFQQI YHQRAGVEGL ISQATGRYQL RRCRYIGLAK TLLQHVITAA AINFSRMWDW WQHVPRSQTR VSHFARIAPT AS
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