Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4728 |
Symbol | |
ID | 3679708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5920029 |
End bp | 5927069 |
Gene Length | 7041 bp |
Protein Length | 2346 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637720084 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_325220 |
Protein GI | 75910924 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTA CAACATTGAA GCCTGGAGAT ATTGCGATCG CTGGTTATAA CACCACTAAT CCTGATAGCA TCCGTGTAGT GGTGCTTGTG GACATTGGTG CTGGTACAAC CTTCAACATT ACAGATAACG GTTGGCAATC TAGTGGTAGC TTCCGCACGG GAGAGGGAGT TCTGACTTAT ACCGCACCTC AGGATATTTC TGCGGGTACA GTTCTCACTT GGACAAATGG CAGTAGTATT AATTCACCAG GGTTTAACTC CAATAACCCT AGTAATTTTG CTCTCAATGC TAGTGGTGAC TCGCTGATTA TTTATACAGG AACATTAGCC AGTCCAACTT TAATTTATTC CCTGAGTTCT GGTAACTGGA CTAACGCAAC TAGCGCGTCC ACATCTGCTG AACCCACGGC GACAAACGGT GGCACACTGG AAACTGGCAA GACAACGGTG GCTATCACTA CCAATGGTAC AAATGGCTAC TATAGCGGTT CTACCGTGGG AACTCAGGCA CAACTACTAG CGGCTATCTC CAACCCAGCA AATTGGACAG CTAGTTCCAC CATCACCGAC ATTGCCAATT GGCGGTCATC ATTCACGCTT TCTCAGCCTT TACCCAACAT CCAAATCACT GAATATATGT ACCAAGGTAC TAACGGTGAA TTTATGGAGT TTACCAACCT TGGCACTACG GCAGTAGATT TTACTGGCTG GAGTTACGAT GATAGCGGTC GTACAGCTGG TACTGTTAGT TTAAGTGCCT TTGGAATTGT GCAGCCTGGA GAATCAGTTA TCCTCACAGA AGCAAGTGAA GCGGATTTCC GCGCCGCCTG GGGATTATCT GCTAATGTTA AGGTCATTGG CGGATTGACA AGAAATCTGG GACGGAGTGA TGAAATTAAC CTGTACGATA ACAATGGTCA ACTCATAGAC CGCCTCACCT ATGGAGATGA AACCTTTACG GGGACGATTC GCACCCAGAC GAGGAGTGGT TGGACTGAAC CAGGGAATTT AGGTGCTGTT ACTATTAATA CTGATTGGCA GCTTTCCACT GTCGATGATG CTCAAAATTC TCGCACCTCT ACAGGCGGTG ATATTGGCAA CCCAGGATTT TATAACATTA ACAACACACC CCTACCAGGT ATAACCATTA CTCAATCTGG TAGTAGCACA GATGTAACTG AAGGTGGTGT GACAGATAGT TACGCCATAG TTCTGAAAAC TCAGCCTACA GCAGATGTGA CGATTAACAT CACTGTTGAT AATCAGGTGA CAACCAGTTC ACCAACCTTG ATTTTCACTC CCCAAAACTG GAATATAGCC CAAACTATCA CAGTGACTGC TGTCAATGAT GATGTAATTG AAGGTACACA CACCAGCACG ATCGCCCACA ATGTTAGTAG TAGTGACACC AATTACAACG GAATTGCGAT CGCTAACATC AATATAAATA TTACCGACAA CGACGCACCA CCCAACACCA ATGTCAATGT CCAAATCACC GAGTATATGT ACACTGGTGC TAATGGTGAA TTCGTCGAGT TTACCAACCT TGGTACTACC GCAGTAGACT TTACTGGCTG GAGTTTTGAT GACAATACTC GCATTGCTGG TTCCTTCAAT CTCAGTGCAT TTGGTATCGT CCAGCCTGGG GAGTCGGTAA TTTTAACGGA AACTGCGGCG GAGACATTCC GTACTGCGTG GAACCTACCC ACCTCGGTAA AAATTATCGG TAACTCTAAC CAAGGTTTGG GACGCACTGA TGAGATTAAC CTGTATGACA GCACCGGCCA GCTAATAGAC CGCCTCACCT ACAATGATGA AGGATTCACC GGGACTATTC GCACCCAAAA CGCTAGCGGT TGGACGACAG CAGCGAATCT TGATGGTTTT GAGATTACTA CTAACTGGCA GCTTTCTGCC ATTAATGATG GTCAAAATTC CCGCTTGTCT ACAGGTAATG ATGTGGGTAA CCCAGGGACT TACATTCCTA ACCCTGTATC CACTGTGGGC GCGCCGAAAA TTGAAGTTAA TCCCAGTACA ACAGACTTAC TGGATGGGCA AAACCTACCT GTCCCCTTAC CTAAAATTGG TGCTGGTGCT ATTAGTGGTG TCATTAACGA TCCTACCGAC CCAGCAAGGA CATTAGGTAT TAACTTTACC TTGAGTGATA CTGACACGCC AGTTGAAAAC CTGACAATTA CAGTCACTAG TAGCAATCAG GCGGTTGTCC CTGATGCCAA CCTGACCTTA ACTGGTACTG GTGCAGAACG CAATCTAAAA ATTAATCCTG TTGGTGTTGG TTTAGCCAAT ATTACCGTTA CCGTGAGTGA CGGTACACTC AGCAGTGCCT ACATTATTAA CTACGCCGCC TCAGCCGGAT CTGTTAGTCC CAGTACCCGT TTCCTCACAG GGACAAGTGA CGCTTCTAGT GCGATCGCTA TTGATGCCAA TTATATGTTC GTTGCCGACG ACGAAGACCA AACAATTCGG CTGTACGATC GCCGTAATTC TGGTTTACCA TTAGCCAGCT TTGACTTTAC CTCATTACTC GGCTTATCTG GTTCCAGTGA AGTAGATATC GAAGCCTCTA CCCGCATTGG TAACACAATT TACTGGTTAG GTTCCCACAG CAACAACAGT AATGGCAGCG ATTCACCCAA CCGGGAACGG ATTTTTGCCA CGCAGATTTC TGGTACAGGG GCAAGTGCTA CCCTGACATT CCAAGGATAC TATCAATTCC TCGAAGATGA TTTAATTGCT TGGGATAATA ACAACGGTCA TGGTTTGGGC GCTGGCTTTT TAGGGCTGGC TGGAAGTGCT GCAAATGGTG TATCGCCTGA AATTCGCAAC GGTTTCAACA TTGAAGGCTT GACAGTTGCA CCCGATGGCA ATACGGCTTA TGTTTCCTTT CGTGCGCCTA ATCAACCAAC AAGCGATCGC ACTAATGCCC TAATTATTCC TGTCACTAAT TTTACCAATA TCCTGAATAC CACAGGCGGT ACATCTGGTG CTACTAGCTT TGGTGCGCCC ATCTTCTTGG ACTTAGGTGG TCGTGGTATC CGCAGTATTG AGCGTAACTC TAGTAATCAA TACCTGATTA TTGCTGGCCC CCCAGGTGGT GCTACAGGAG TAGCCCCCAA TGATTTCCGT CTCTACACTT GGACTGGTAA TGCTACTGAT GCGCCTGTAT TACGTATTGC TGATTTAACA GCGTTGAATA CTAACGGTAG TTTTGAATCC ATTGTGGAAG TGCCAGATTC CCTCACCAAC AATACCCAGA TTCAATTGCT GGTAGATAAC GGCGATACCG TTTGGTACAA CAACGGCACA ATTTCCAAAG ACTTAGCTCA GAATAACTTC CAAAAATTCC GCAGTGAAGT CATAACCCTT GGTTCTCCAG TCCTCACTCT ACCAGTCGGA GCAATTTCCC TCAAGACTCC TTACTCTCAA GAGTTTAATA ATCTGATTAG TTCGGGTTCA GAAACCTGGA CTGATAGCTC TACAATCGCT GGTTGGTATA CTGCTAGAAC CGGAACCGGC ACAACCATTG TCGCCTCAAC AGGAAGCAAC ACCGCAGGTA ATCTCTACAG CTTCGGTTTG GATAGTTCAG ACCGTGCTTT AGGTTCTATC GGTTCAGGTA ACGCAGCCGC AGGTACATTT TATTGGGGTA GCAGGTTTTT TAACGACACA GGTAATGTAG TTAATCAGCT GTATGTTAAC TATTACGGTG AACAATGGCG TAGTGGTGGT ACTACTTCTA ATCCTCAAAC CGTTGATTTC CAATATCAAA CCGGTGCAAC AAGCTTAACT GGTGGTACTT GGGTTGATGT CAACAATCTA GATTTTACTA GTCTGATCAA CAATACGACT GCTGGCGCAC TCAATGGTAA TGCAAGTGCC AACCGCAATC TAATCTCCGG CACAATTAGC GGTTTATCTC TCAATCCTGG TGAAGAAATT TGGTTACGTT GGGTCGATAT TGACCATCCA GGCACTGATC ATGGTTTGAG TATTGATGAT GTAAAAGTTT CCACTGCCCC ATTACCTAGC ATCACCTTAA TTGAGTCTGG TGGTAGCACC AACGTTACTG AAGGAGGGGC AACGGATACC TACACCATCG TCCTAAATAC CCAGCCCACA GCCAATGTTA CCGTTACCAT TAACCCTGAT TCTCAAACTA CTACTAGTGT CAATACTCTC ACCTTTACCC CTGCTAACTG GAATACACCC CAAACTGTAA CGATAACCGC AGTTAATGAT GACCTAGTAG AAGGCACACA CACCAGCGTG ATTACCCATA CAGTAACTAG TGACGATACT AGCTACAACG GAATTAACAT CGGCTCAGTT ACTGCCACAA TTACCGATAA TGATGTTGCC CTCACCATTA CCAAAATTCA CCAAATTCAA GGTAGTGGTA CAACCTTTAA CTCTGCTTTT GGTAGCATTC GCACAATTGA AGGTGTTGTG GTTGCTGCAT TCCCCGGTGG TTCAGGTTTA AATGGCTTTT TCGTCCAAGA AGAAGATGCA GACGCTGATA ATGACTCTAC AACTTCTGAA GGAATCTTTG TTTTCGACCC CACAGGCCAG TTCTCTGGTA GCGTTGGTGA TAAAGTCCGG GTGACTGGCA GTGTGAGCGA ATTTAGCACT AACAATGGTG TCAGCAGCCT GACCCAACTT TCTAGCGTCA GCAGCATCAT CAACTTAGGC GCAGACATAC TACCAACAGT GAGTAATATC CAGTTACCTG TGACGACTGT CGCAGATTTG GAACGCTACG AAGGGATGCG GGTAAATATC AGTGCTGGTA GTGGGGATTT AACTGTTACC GAACATTTTC AACTTGGTCG TTTCGGTCAG GTGGTTCTCT CTGCAACTGG TACTAGTAAC CAACTTGGTA CGGATGGCAG GCTGGAACAA TACACCCAAT TTAATGACCC CAGTGTTACT GGCTACGCTG CTTATTTAGA TGAGATTGCC AAACGACGGA TTATCTTAGA TGACGGTAGC AGCACACAAA ACCCAGCAAC CATCATCTTT GGTCGTGGTG GTGAACCTTT AAGTGCTACC AACACCCTAC GGGGTGGCGA TACCGTTGCT AGTATCACTG GCATTTTAGA CCACCGCTTT GAAGGATACC GCGTTCAAAC TTCAACAGGC GTAAACTTTA CACCAGCCAA TCCTCGTCCA ACAACCACAC CAGATGTAGG CGGTACACTC AAGGTTGCCA GCTTTAACGT CCTAAATTAC TTTAATGGTG ATGGTACTGG TAGCGGCTTC ACCAGTCCTG AACAAAGGGG TGCAGAAAAC CTGACTGAGT TCAACCGCCA GCGTGACAAG ACAATTGCAG CCATTCTGGG GTTAAATGCC GATGTTGTGG GTCTGATTGA AATCGAAAAT GATGGTTACG GTGCTAATAG TGCCATTCAA GATTTAGTCA ATGGACTCAA TGCTGTTGCC GGTGCGGGTA CTTACGCTTT TATTAATCCA GGACTGTCTC AACTAGGTAC GGATGCGATC GCCGTTGGTT TGATCTATAA ACCTAATAGT GTCACCCCCA TTGGTACAGC CGCCACAGTC GCCGATGGCT TTGGTCAAGG TGCGTTTGAT AACAATAACC GTAAACCCCT AGCCCAAACT TTCCGACAAA ACTCCACAGG TGAACAGTTC ACAGCCGTCA TCAATCACTT TAAATCTAAG GGTTCAAGTT TTGGAAATCC TGGCGACGCT GACGCTGGCG ATGGTCAAGG TTTATCTAAT GGAACACGGA CTCGTGCATC CCAAGATTTG GCAGCATGGT TAGCGACAAA TCCCACGGGA ACTACTGACA CAGATTATCT CATTCTCGGC GACCTCAACG CCTACGCCCA GGAAGATCCA ATCAGGGCTT TGGAAAATGC CGGATATAAC AACCTGTTGC CAAATACCAC CTATTCCTAC GTTTTTGATG GTCAGTGGGG TGCTTTAGAC CATGCTTTAG CTAATGCCTC ACTGACTGCA CAATTAAGTG GTGCTGTCAA GTGGCATATT AATGCTGATG AACCAAATGT TCTTGACTAC AACACCAACT TCAAGTCAGT AGGACAACAA ACCAGCTTAT ACAGTCCTGA TGCTTTCCGT TCTTCAGACC ATGACCCGGT GATTGTAGGG CTGAATTTAA ACACTGCACC CATAGCTGTG AATGATATAG CCACGACCAA TGAAAACACG GCTGTCAACA TTAACGTCCT GACTAATGAC AGTGATGCGA ATGGTGATGC TTTACAACTG AGTTTGGTAT CTAACCCTGT CAACGGTATT GCTGTTGTCA ATGACAATGG TACACCAGGT AACTTTGCTG ATGACTTTAT TATCTACACG CCCAATACTG GCTATGTTGG CAGTGACAGT TTCACTTATG GTATCAGTGA TGGTAAGGGT GGCACAGCCA CAGCATCTGT GAGTCTGACG ATCAACGCTA GTGGCGGCAT TATTGGTACT CCAGATAACG ATATTCTCAC AGGTACTAAT AGGAATGATC TCATCCGGGG TTTGGGTGGT AATGATTTAT TAATAGGTGG TAACGGTAAT GATACCCTCT ATGGTGACAG AGGCAAAGAT ATCTTACTAG GTGGTAACGG TAACGATACC CTGTATGGTG GTGACGGCAA TGATACCTTA ATCGGTGGTA ATGGAGATGA TTTGTTAGTT GGTGGTAAGG AAAATGACTT ATTGATTGGC GGTAACGGCC GCGATCGCTT CTATCTGAGT GATACTAGAA CTGGAGAGTT TGATATCATC ACTGATTTTA AAGTCGGGCA AGATACAATC TTCATCTCCA AGACAGAATT TGGACTTAGC CAAGCTTTGG GTACACTTAA TCCGGGTTTA TTCCGCTTGG GTAGTAATGC GACAGCAGCA GGCGATCGCT TCATCTACAA CAATACTACA GGCCAACTGT TTTTTGATGA AGATGGCATT GGCGGTGCAG CCAAAATTCA AATAGGTTTG TTATCTAATA AACCCGCAAT CACTAGTAGC AGTATTACTA TAGCTGCTTA A
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Protein sequence | MTATTLKPGD IAIAGYNTTN PDSIRVVVLV DIGAGTTFNI TDNGWQSSGS FRTGEGVLTY TAPQDISAGT VLTWTNGSSI NSPGFNSNNP SNFALNASGD SLIIYTGTLA SPTLIYSLSS GNWTNATSAS TSAEPTATNG GTLETGKTTV AITTNGTNGY YSGSTVGTQA QLLAAISNPA NWTASSTITD IANWRSSFTL SQPLPNIQIT EYMYQGTNGE FMEFTNLGTT AVDFTGWSYD DSGRTAGTVS LSAFGIVQPG ESVILTEASE ADFRAAWGLS ANVKVIGGLT RNLGRSDEIN LYDNNGQLID RLTYGDETFT GTIRTQTRSG WTEPGNLGAV TINTDWQLST VDDAQNSRTS TGGDIGNPGF YNINNTPLPG ITITQSGSST DVTEGGVTDS YAIVLKTQPT ADVTINITVD NQVTTSSPTL IFTPQNWNIA QTITVTAVND DVIEGTHTST IAHNVSSSDT NYNGIAIANI NINITDNDAP PNTNVNVQIT EYMYTGANGE FVEFTNLGTT AVDFTGWSFD DNTRIAGSFN LSAFGIVQPG ESVILTETAA ETFRTAWNLP TSVKIIGNSN QGLGRTDEIN LYDSTGQLID RLTYNDEGFT GTIRTQNASG WTTAANLDGF EITTNWQLSA INDGQNSRLS TGNDVGNPGT YIPNPVSTVG APKIEVNPST TDLLDGQNLP VPLPKIGAGA ISGVINDPTD PARTLGINFT LSDTDTPVEN LTITVTSSNQ AVVPDANLTL TGTGAERNLK INPVGVGLAN ITVTVSDGTL SSAYIINYAA SAGSVSPSTR FLTGTSDASS AIAIDANYMF VADDEDQTIR LYDRRNSGLP LASFDFTSLL GLSGSSEVDI EASTRIGNTI YWLGSHSNNS NGSDSPNRER IFATQISGTG ASATLTFQGY YQFLEDDLIA WDNNNGHGLG AGFLGLAGSA ANGVSPEIRN GFNIEGLTVA PDGNTAYVSF RAPNQPTSDR TNALIIPVTN FTNILNTTGG TSGATSFGAP IFLDLGGRGI RSIERNSSNQ YLIIAGPPGG ATGVAPNDFR LYTWTGNATD APVLRIADLT ALNTNGSFES IVEVPDSLTN NTQIQLLVDN GDTVWYNNGT ISKDLAQNNF QKFRSEVITL GSPVLTLPVG AISLKTPYSQ EFNNLISSGS ETWTDSSTIA GWYTARTGTG TTIVASTGSN TAGNLYSFGL DSSDRALGSI GSGNAAAGTF YWGSRFFNDT GNVVNQLYVN YYGEQWRSGG TTSNPQTVDF QYQTGATSLT GGTWVDVNNL DFTSLINNTT AGALNGNASA NRNLISGTIS GLSLNPGEEI WLRWVDIDHP GTDHGLSIDD VKVSTAPLPS ITLIESGGST NVTEGGATDT YTIVLNTQPT ANVTVTINPD SQTTTSVNTL TFTPANWNTP QTVTITAVND DLVEGTHTSV ITHTVTSDDT SYNGINIGSV TATITDNDVA LTITKIHQIQ GSGTTFNSAF GSIRTIEGVV VAAFPGGSGL NGFFVQEEDA DADNDSTTSE GIFVFDPTGQ FSGSVGDKVR VTGSVSEFST NNGVSSLTQL SSVSSIINLG ADILPTVSNI QLPVTTVADL ERYEGMRVNI SAGSGDLTVT EHFQLGRFGQ VVLSATGTSN QLGTDGRLEQ YTQFNDPSVT GYAAYLDEIA KRRIILDDGS STQNPATIIF GRGGEPLSAT NTLRGGDTVA SITGILDHRF EGYRVQTSTG VNFTPANPRP TTTPDVGGTL KVASFNVLNY FNGDGTGSGF TSPEQRGAEN LTEFNRQRDK TIAAILGLNA DVVGLIEIEN DGYGANSAIQ DLVNGLNAVA GAGTYAFINP GLSQLGTDAI AVGLIYKPNS VTPIGTAATV ADGFGQGAFD NNNRKPLAQT FRQNSTGEQF TAVINHFKSK GSSFGNPGDA DAGDGQGLSN GTRTRASQDL AAWLATNPTG TTDTDYLILG DLNAYAQEDP IRALENAGYN NLLPNTTYSY VFDGQWGALD HALANASLTA QLSGAVKWHI NADEPNVLDY NTNFKSVGQQ TSLYSPDAFR SSDHDPVIVG LNLNTAPIAV NDIATTNENT AVNINVLTND SDANGDALQL SLVSNPVNGI AVVNDNGTPG NFADDFIIYT PNTGYVGSDS FTYGISDGKG GTATASVSLT INASGGIIGT PDNDILTGTN RNDLIRGLGG NDLLIGGNGN DTLYGDRGKD ILLGGNGNDT LYGGDGNDTL IGGNGDDLLV GGKENDLLIG GNGRDRFYLS DTRTGEFDII TDFKVGQDTI FISKTEFGLS QALGTLNPGL FRLGSNATAA GDRFIYNNTT GQLFFDEDGI GGAAKIQIGL LSNKPAITSS SITIAA
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