Gene Ava_4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4728 
Symbol 
ID3679708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5920029 
End bp5927069 
Gene Length7041 bp 
Protein Length2346 aa 
Translation table11 
GC content46% 
IMG OID637720084 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_325220 
Protein GI75910924 
COG category[R] General function prediction only 
COG ID[COG2374] Predicted extracellular nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTA CAACATTGAA GCCTGGAGAT ATTGCGATCG CTGGTTATAA CACCACTAAT 
CCTGATAGCA TCCGTGTAGT GGTGCTTGTG GACATTGGTG CTGGTACAAC CTTCAACATT
ACAGATAACG GTTGGCAATC TAGTGGTAGC TTCCGCACGG GAGAGGGAGT TCTGACTTAT
ACCGCACCTC AGGATATTTC TGCGGGTACA GTTCTCACTT GGACAAATGG CAGTAGTATT
AATTCACCAG GGTTTAACTC CAATAACCCT AGTAATTTTG CTCTCAATGC TAGTGGTGAC
TCGCTGATTA TTTATACAGG AACATTAGCC AGTCCAACTT TAATTTATTC CCTGAGTTCT
GGTAACTGGA CTAACGCAAC TAGCGCGTCC ACATCTGCTG AACCCACGGC GACAAACGGT
GGCACACTGG AAACTGGCAA GACAACGGTG GCTATCACTA CCAATGGTAC AAATGGCTAC
TATAGCGGTT CTACCGTGGG AACTCAGGCA CAACTACTAG CGGCTATCTC CAACCCAGCA
AATTGGACAG CTAGTTCCAC CATCACCGAC ATTGCCAATT GGCGGTCATC ATTCACGCTT
TCTCAGCCTT TACCCAACAT CCAAATCACT GAATATATGT ACCAAGGTAC TAACGGTGAA
TTTATGGAGT TTACCAACCT TGGCACTACG GCAGTAGATT TTACTGGCTG GAGTTACGAT
GATAGCGGTC GTACAGCTGG TACTGTTAGT TTAAGTGCCT TTGGAATTGT GCAGCCTGGA
GAATCAGTTA TCCTCACAGA AGCAAGTGAA GCGGATTTCC GCGCCGCCTG GGGATTATCT
GCTAATGTTA AGGTCATTGG CGGATTGACA AGAAATCTGG GACGGAGTGA TGAAATTAAC
CTGTACGATA ACAATGGTCA ACTCATAGAC CGCCTCACCT ATGGAGATGA AACCTTTACG
GGGACGATTC GCACCCAGAC GAGGAGTGGT TGGACTGAAC CAGGGAATTT AGGTGCTGTT
ACTATTAATA CTGATTGGCA GCTTTCCACT GTCGATGATG CTCAAAATTC TCGCACCTCT
ACAGGCGGTG ATATTGGCAA CCCAGGATTT TATAACATTA ACAACACACC CCTACCAGGT
ATAACCATTA CTCAATCTGG TAGTAGCACA GATGTAACTG AAGGTGGTGT GACAGATAGT
TACGCCATAG TTCTGAAAAC TCAGCCTACA GCAGATGTGA CGATTAACAT CACTGTTGAT
AATCAGGTGA CAACCAGTTC ACCAACCTTG ATTTTCACTC CCCAAAACTG GAATATAGCC
CAAACTATCA CAGTGACTGC TGTCAATGAT GATGTAATTG AAGGTACACA CACCAGCACG
ATCGCCCACA ATGTTAGTAG TAGTGACACC AATTACAACG GAATTGCGAT CGCTAACATC
AATATAAATA TTACCGACAA CGACGCACCA CCCAACACCA ATGTCAATGT CCAAATCACC
GAGTATATGT ACACTGGTGC TAATGGTGAA TTCGTCGAGT TTACCAACCT TGGTACTACC
GCAGTAGACT TTACTGGCTG GAGTTTTGAT GACAATACTC GCATTGCTGG TTCCTTCAAT
CTCAGTGCAT TTGGTATCGT CCAGCCTGGG GAGTCGGTAA TTTTAACGGA AACTGCGGCG
GAGACATTCC GTACTGCGTG GAACCTACCC ACCTCGGTAA AAATTATCGG TAACTCTAAC
CAAGGTTTGG GACGCACTGA TGAGATTAAC CTGTATGACA GCACCGGCCA GCTAATAGAC
CGCCTCACCT ACAATGATGA AGGATTCACC GGGACTATTC GCACCCAAAA CGCTAGCGGT
TGGACGACAG CAGCGAATCT TGATGGTTTT GAGATTACTA CTAACTGGCA GCTTTCTGCC
ATTAATGATG GTCAAAATTC CCGCTTGTCT ACAGGTAATG ATGTGGGTAA CCCAGGGACT
TACATTCCTA ACCCTGTATC CACTGTGGGC GCGCCGAAAA TTGAAGTTAA TCCCAGTACA
ACAGACTTAC TGGATGGGCA AAACCTACCT GTCCCCTTAC CTAAAATTGG TGCTGGTGCT
ATTAGTGGTG TCATTAACGA TCCTACCGAC CCAGCAAGGA CATTAGGTAT TAACTTTACC
TTGAGTGATA CTGACACGCC AGTTGAAAAC CTGACAATTA CAGTCACTAG TAGCAATCAG
GCGGTTGTCC CTGATGCCAA CCTGACCTTA ACTGGTACTG GTGCAGAACG CAATCTAAAA
ATTAATCCTG TTGGTGTTGG TTTAGCCAAT ATTACCGTTA CCGTGAGTGA CGGTACACTC
AGCAGTGCCT ACATTATTAA CTACGCCGCC TCAGCCGGAT CTGTTAGTCC CAGTACCCGT
TTCCTCACAG GGACAAGTGA CGCTTCTAGT GCGATCGCTA TTGATGCCAA TTATATGTTC
GTTGCCGACG ACGAAGACCA AACAATTCGG CTGTACGATC GCCGTAATTC TGGTTTACCA
TTAGCCAGCT TTGACTTTAC CTCATTACTC GGCTTATCTG GTTCCAGTGA AGTAGATATC
GAAGCCTCTA CCCGCATTGG TAACACAATT TACTGGTTAG GTTCCCACAG CAACAACAGT
AATGGCAGCG ATTCACCCAA CCGGGAACGG ATTTTTGCCA CGCAGATTTC TGGTACAGGG
GCAAGTGCTA CCCTGACATT CCAAGGATAC TATCAATTCC TCGAAGATGA TTTAATTGCT
TGGGATAATA ACAACGGTCA TGGTTTGGGC GCTGGCTTTT TAGGGCTGGC TGGAAGTGCT
GCAAATGGTG TATCGCCTGA AATTCGCAAC GGTTTCAACA TTGAAGGCTT GACAGTTGCA
CCCGATGGCA ATACGGCTTA TGTTTCCTTT CGTGCGCCTA ATCAACCAAC AAGCGATCGC
ACTAATGCCC TAATTATTCC TGTCACTAAT TTTACCAATA TCCTGAATAC CACAGGCGGT
ACATCTGGTG CTACTAGCTT TGGTGCGCCC ATCTTCTTGG ACTTAGGTGG TCGTGGTATC
CGCAGTATTG AGCGTAACTC TAGTAATCAA TACCTGATTA TTGCTGGCCC CCCAGGTGGT
GCTACAGGAG TAGCCCCCAA TGATTTCCGT CTCTACACTT GGACTGGTAA TGCTACTGAT
GCGCCTGTAT TACGTATTGC TGATTTAACA GCGTTGAATA CTAACGGTAG TTTTGAATCC
ATTGTGGAAG TGCCAGATTC CCTCACCAAC AATACCCAGA TTCAATTGCT GGTAGATAAC
GGCGATACCG TTTGGTACAA CAACGGCACA ATTTCCAAAG ACTTAGCTCA GAATAACTTC
CAAAAATTCC GCAGTGAAGT CATAACCCTT GGTTCTCCAG TCCTCACTCT ACCAGTCGGA
GCAATTTCCC TCAAGACTCC TTACTCTCAA GAGTTTAATA ATCTGATTAG TTCGGGTTCA
GAAACCTGGA CTGATAGCTC TACAATCGCT GGTTGGTATA CTGCTAGAAC CGGAACCGGC
ACAACCATTG TCGCCTCAAC AGGAAGCAAC ACCGCAGGTA ATCTCTACAG CTTCGGTTTG
GATAGTTCAG ACCGTGCTTT AGGTTCTATC GGTTCAGGTA ACGCAGCCGC AGGTACATTT
TATTGGGGTA GCAGGTTTTT TAACGACACA GGTAATGTAG TTAATCAGCT GTATGTTAAC
TATTACGGTG AACAATGGCG TAGTGGTGGT ACTACTTCTA ATCCTCAAAC CGTTGATTTC
CAATATCAAA CCGGTGCAAC AAGCTTAACT GGTGGTACTT GGGTTGATGT CAACAATCTA
GATTTTACTA GTCTGATCAA CAATACGACT GCTGGCGCAC TCAATGGTAA TGCAAGTGCC
AACCGCAATC TAATCTCCGG CACAATTAGC GGTTTATCTC TCAATCCTGG TGAAGAAATT
TGGTTACGTT GGGTCGATAT TGACCATCCA GGCACTGATC ATGGTTTGAG TATTGATGAT
GTAAAAGTTT CCACTGCCCC ATTACCTAGC ATCACCTTAA TTGAGTCTGG TGGTAGCACC
AACGTTACTG AAGGAGGGGC AACGGATACC TACACCATCG TCCTAAATAC CCAGCCCACA
GCCAATGTTA CCGTTACCAT TAACCCTGAT TCTCAAACTA CTACTAGTGT CAATACTCTC
ACCTTTACCC CTGCTAACTG GAATACACCC CAAACTGTAA CGATAACCGC AGTTAATGAT
GACCTAGTAG AAGGCACACA CACCAGCGTG ATTACCCATA CAGTAACTAG TGACGATACT
AGCTACAACG GAATTAACAT CGGCTCAGTT ACTGCCACAA TTACCGATAA TGATGTTGCC
CTCACCATTA CCAAAATTCA CCAAATTCAA GGTAGTGGTA CAACCTTTAA CTCTGCTTTT
GGTAGCATTC GCACAATTGA AGGTGTTGTG GTTGCTGCAT TCCCCGGTGG TTCAGGTTTA
AATGGCTTTT TCGTCCAAGA AGAAGATGCA GACGCTGATA ATGACTCTAC AACTTCTGAA
GGAATCTTTG TTTTCGACCC CACAGGCCAG TTCTCTGGTA GCGTTGGTGA TAAAGTCCGG
GTGACTGGCA GTGTGAGCGA ATTTAGCACT AACAATGGTG TCAGCAGCCT GACCCAACTT
TCTAGCGTCA GCAGCATCAT CAACTTAGGC GCAGACATAC TACCAACAGT GAGTAATATC
CAGTTACCTG TGACGACTGT CGCAGATTTG GAACGCTACG AAGGGATGCG GGTAAATATC
AGTGCTGGTA GTGGGGATTT AACTGTTACC GAACATTTTC AACTTGGTCG TTTCGGTCAG
GTGGTTCTCT CTGCAACTGG TACTAGTAAC CAACTTGGTA CGGATGGCAG GCTGGAACAA
TACACCCAAT TTAATGACCC CAGTGTTACT GGCTACGCTG CTTATTTAGA TGAGATTGCC
AAACGACGGA TTATCTTAGA TGACGGTAGC AGCACACAAA ACCCAGCAAC CATCATCTTT
GGTCGTGGTG GTGAACCTTT AAGTGCTACC AACACCCTAC GGGGTGGCGA TACCGTTGCT
AGTATCACTG GCATTTTAGA CCACCGCTTT GAAGGATACC GCGTTCAAAC TTCAACAGGC
GTAAACTTTA CACCAGCCAA TCCTCGTCCA ACAACCACAC CAGATGTAGG CGGTACACTC
AAGGTTGCCA GCTTTAACGT CCTAAATTAC TTTAATGGTG ATGGTACTGG TAGCGGCTTC
ACCAGTCCTG AACAAAGGGG TGCAGAAAAC CTGACTGAGT TCAACCGCCA GCGTGACAAG
ACAATTGCAG CCATTCTGGG GTTAAATGCC GATGTTGTGG GTCTGATTGA AATCGAAAAT
GATGGTTACG GTGCTAATAG TGCCATTCAA GATTTAGTCA ATGGACTCAA TGCTGTTGCC
GGTGCGGGTA CTTACGCTTT TATTAATCCA GGACTGTCTC AACTAGGTAC GGATGCGATC
GCCGTTGGTT TGATCTATAA ACCTAATAGT GTCACCCCCA TTGGTACAGC CGCCACAGTC
GCCGATGGCT TTGGTCAAGG TGCGTTTGAT AACAATAACC GTAAACCCCT AGCCCAAACT
TTCCGACAAA ACTCCACAGG TGAACAGTTC ACAGCCGTCA TCAATCACTT TAAATCTAAG
GGTTCAAGTT TTGGAAATCC TGGCGACGCT GACGCTGGCG ATGGTCAAGG TTTATCTAAT
GGAACACGGA CTCGTGCATC CCAAGATTTG GCAGCATGGT TAGCGACAAA TCCCACGGGA
ACTACTGACA CAGATTATCT CATTCTCGGC GACCTCAACG CCTACGCCCA GGAAGATCCA
ATCAGGGCTT TGGAAAATGC CGGATATAAC AACCTGTTGC CAAATACCAC CTATTCCTAC
GTTTTTGATG GTCAGTGGGG TGCTTTAGAC CATGCTTTAG CTAATGCCTC ACTGACTGCA
CAATTAAGTG GTGCTGTCAA GTGGCATATT AATGCTGATG AACCAAATGT TCTTGACTAC
AACACCAACT TCAAGTCAGT AGGACAACAA ACCAGCTTAT ACAGTCCTGA TGCTTTCCGT
TCTTCAGACC ATGACCCGGT GATTGTAGGG CTGAATTTAA ACACTGCACC CATAGCTGTG
AATGATATAG CCACGACCAA TGAAAACACG GCTGTCAACA TTAACGTCCT GACTAATGAC
AGTGATGCGA ATGGTGATGC TTTACAACTG AGTTTGGTAT CTAACCCTGT CAACGGTATT
GCTGTTGTCA ATGACAATGG TACACCAGGT AACTTTGCTG ATGACTTTAT TATCTACACG
CCCAATACTG GCTATGTTGG CAGTGACAGT TTCACTTATG GTATCAGTGA TGGTAAGGGT
GGCACAGCCA CAGCATCTGT GAGTCTGACG ATCAACGCTA GTGGCGGCAT TATTGGTACT
CCAGATAACG ATATTCTCAC AGGTACTAAT AGGAATGATC TCATCCGGGG TTTGGGTGGT
AATGATTTAT TAATAGGTGG TAACGGTAAT GATACCCTCT ATGGTGACAG AGGCAAAGAT
ATCTTACTAG GTGGTAACGG TAACGATACC CTGTATGGTG GTGACGGCAA TGATACCTTA
ATCGGTGGTA ATGGAGATGA TTTGTTAGTT GGTGGTAAGG AAAATGACTT ATTGATTGGC
GGTAACGGCC GCGATCGCTT CTATCTGAGT GATACTAGAA CTGGAGAGTT TGATATCATC
ACTGATTTTA AAGTCGGGCA AGATACAATC TTCATCTCCA AGACAGAATT TGGACTTAGC
CAAGCTTTGG GTACACTTAA TCCGGGTTTA TTCCGCTTGG GTAGTAATGC GACAGCAGCA
GGCGATCGCT TCATCTACAA CAATACTACA GGCCAACTGT TTTTTGATGA AGATGGCATT
GGCGGTGCAG CCAAAATTCA AATAGGTTTG TTATCTAATA AACCCGCAAT CACTAGTAGC
AGTATTACTA TAGCTGCTTA A
 
Protein sequence
MTATTLKPGD IAIAGYNTTN PDSIRVVVLV DIGAGTTFNI TDNGWQSSGS FRTGEGVLTY 
TAPQDISAGT VLTWTNGSSI NSPGFNSNNP SNFALNASGD SLIIYTGTLA SPTLIYSLSS
GNWTNATSAS TSAEPTATNG GTLETGKTTV AITTNGTNGY YSGSTVGTQA QLLAAISNPA
NWTASSTITD IANWRSSFTL SQPLPNIQIT EYMYQGTNGE FMEFTNLGTT AVDFTGWSYD
DSGRTAGTVS LSAFGIVQPG ESVILTEASE ADFRAAWGLS ANVKVIGGLT RNLGRSDEIN
LYDNNGQLID RLTYGDETFT GTIRTQTRSG WTEPGNLGAV TINTDWQLST VDDAQNSRTS
TGGDIGNPGF YNINNTPLPG ITITQSGSST DVTEGGVTDS YAIVLKTQPT ADVTINITVD
NQVTTSSPTL IFTPQNWNIA QTITVTAVND DVIEGTHTST IAHNVSSSDT NYNGIAIANI
NINITDNDAP PNTNVNVQIT EYMYTGANGE FVEFTNLGTT AVDFTGWSFD DNTRIAGSFN
LSAFGIVQPG ESVILTETAA ETFRTAWNLP TSVKIIGNSN QGLGRTDEIN LYDSTGQLID
RLTYNDEGFT GTIRTQNASG WTTAANLDGF EITTNWQLSA INDGQNSRLS TGNDVGNPGT
YIPNPVSTVG APKIEVNPST TDLLDGQNLP VPLPKIGAGA ISGVINDPTD PARTLGINFT
LSDTDTPVEN LTITVTSSNQ AVVPDANLTL TGTGAERNLK INPVGVGLAN ITVTVSDGTL
SSAYIINYAA SAGSVSPSTR FLTGTSDASS AIAIDANYMF VADDEDQTIR LYDRRNSGLP
LASFDFTSLL GLSGSSEVDI EASTRIGNTI YWLGSHSNNS NGSDSPNRER IFATQISGTG
ASATLTFQGY YQFLEDDLIA WDNNNGHGLG AGFLGLAGSA ANGVSPEIRN GFNIEGLTVA
PDGNTAYVSF RAPNQPTSDR TNALIIPVTN FTNILNTTGG TSGATSFGAP IFLDLGGRGI
RSIERNSSNQ YLIIAGPPGG ATGVAPNDFR LYTWTGNATD APVLRIADLT ALNTNGSFES
IVEVPDSLTN NTQIQLLVDN GDTVWYNNGT ISKDLAQNNF QKFRSEVITL GSPVLTLPVG
AISLKTPYSQ EFNNLISSGS ETWTDSSTIA GWYTARTGTG TTIVASTGSN TAGNLYSFGL
DSSDRALGSI GSGNAAAGTF YWGSRFFNDT GNVVNQLYVN YYGEQWRSGG TTSNPQTVDF
QYQTGATSLT GGTWVDVNNL DFTSLINNTT AGALNGNASA NRNLISGTIS GLSLNPGEEI
WLRWVDIDHP GTDHGLSIDD VKVSTAPLPS ITLIESGGST NVTEGGATDT YTIVLNTQPT
ANVTVTINPD SQTTTSVNTL TFTPANWNTP QTVTITAVND DLVEGTHTSV ITHTVTSDDT
SYNGINIGSV TATITDNDVA LTITKIHQIQ GSGTTFNSAF GSIRTIEGVV VAAFPGGSGL
NGFFVQEEDA DADNDSTTSE GIFVFDPTGQ FSGSVGDKVR VTGSVSEFST NNGVSSLTQL
SSVSSIINLG ADILPTVSNI QLPVTTVADL ERYEGMRVNI SAGSGDLTVT EHFQLGRFGQ
VVLSATGTSN QLGTDGRLEQ YTQFNDPSVT GYAAYLDEIA KRRIILDDGS STQNPATIIF
GRGGEPLSAT NTLRGGDTVA SITGILDHRF EGYRVQTSTG VNFTPANPRP TTTPDVGGTL
KVASFNVLNY FNGDGTGSGF TSPEQRGAEN LTEFNRQRDK TIAAILGLNA DVVGLIEIEN
DGYGANSAIQ DLVNGLNAVA GAGTYAFINP GLSQLGTDAI AVGLIYKPNS VTPIGTAATV
ADGFGQGAFD NNNRKPLAQT FRQNSTGEQF TAVINHFKSK GSSFGNPGDA DAGDGQGLSN
GTRTRASQDL AAWLATNPTG TTDTDYLILG DLNAYAQEDP IRALENAGYN NLLPNTTYSY
VFDGQWGALD HALANASLTA QLSGAVKWHI NADEPNVLDY NTNFKSVGQQ TSLYSPDAFR
SSDHDPVIVG LNLNTAPIAV NDIATTNENT AVNINVLTND SDANGDALQL SLVSNPVNGI
AVVNDNGTPG NFADDFIIYT PNTGYVGSDS FTYGISDGKG GTATASVSLT INASGGIIGT
PDNDILTGTN RNDLIRGLGG NDLLIGGNGN DTLYGDRGKD ILLGGNGNDT LYGGDGNDTL
IGGNGDDLLV GGKENDLLIG GNGRDRFYLS DTRTGEFDII TDFKVGQDTI FISKTEFGLS
QALGTLNPGL FRLGSNATAA GDRFIYNNTT GQLFFDEDGI GGAAKIQIGL LSNKPAITSS
SITIAA