Gene Ava_4728 details

Gene Information

• Locus tag: Ava_4728
• ID: 3679708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: +
• Start bp: 5920029
• End bp: 5927069
• Gene Length: 7041 bp
• Protein Length: 2346 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637720084
• Product: endonuclease/exonuclease/phosphatase
• Protein accession: YP_325220
• Protein GI: 75910924
• COG category: [R] General function prediction only
• COG ID: [COG2374] Predicted extracellular nuclease

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAGCTA CAACATTGAA GCCTGGAGAT ATTGCGATCG CTGGTTATAA CACCACTAAT 
CCTGATAGCA TCCGTGTAGT GGTGCTTGTG GACATTGGTG CTGGTACAAC CTTCAACATT 
ACAGATAACG GTTGGCAATC TAGTGGTAGC TTCCGCACGG GAGAGGGAGT TCTGACTTAT 
ACCGCACCTC AGGATATTTC TGCGGGTACA GTTCTCACTT GGACAAATGG CAGTAGTATT 
AATTCACCAG GGTTTAACTC CAATAACCCT AGTAATTTTG CTCTCAATGC TAGTGGTGAC 
TCGCTGATTA TTTATACAGG AACATTAGCC AGTCCAACTT TAATTTATTC CCTGAGTTCT 
GGTAACTGGA CTAACGCAAC TAGCGCGTCC ACATCTGCTG AACCCACGGC GACAAACGGT 
GGCACACTGG AAACTGGCAA GACAACGGTG GCTATCACTA CCAATGGTAC AAATGGCTAC 
TATAGCGGTT CTACCGTGGG AACTCAGGCA CAACTACTAG CGGCTATCTC CAACCCAGCA 
AATTGGACAG CTAGTTCCAC CATCACCGAC ATTGCCAATT GGCGGTCATC ATTCACGCTT 
TCTCAGCCTT TACCCAACAT CCAAATCACT GAATATATGT ACCAAGGTAC TAACGGTGAA 
TTTATGGAGT TTACCAACCT TGGCACTACG GCAGTAGATT TTACTGGCTG GAGTTACGAT 
GATAGCGGTC GTACAGCTGG TACTGTTAGT TTAAGTGCCT TTGGAATTGT GCAGCCTGGA 
GAATCAGTTA TCCTCACAGA AGCAAGTGAA GCGGATTTCC GCGCCGCCTG GGGATTATCT 
GCTAATGTTA AGGTCATTGG CGGATTGACA AGAAATCTGG GACGGAGTGA TGAAATTAAC 
CTGTACGATA ACAATGGTCA ACTCATAGAC CGCCTCACCT ATGGAGATGA AACCTTTACG 
GGGACGATTC GCACCCAGAC GAGGAGTGGT TGGACTGAAC CAGGGAATTT AGGTGCTGTT 
ACTATTAATA CTGATTGGCA GCTTTCCACT GTCGATGATG CTCAAAATTC TCGCACCTCT 
ACAGGCGGTG ATATTGGCAA CCCAGGATTT TATAACATTA ACAACACACC CCTACCAGGT 
ATAACCATTA CTCAATCTGG TAGTAGCACA GATGTAACTG AAGGTGGTGT GACAGATAGT 
TACGCCATAG TTCTGAAAAC TCAGCCTACA GCAGATGTGA CGATTAACAT CACTGTTGAT 
AATCAGGTGA CAACCAGTTC ACCAACCTTG ATTTTCACTC CCCAAAACTG GAATATAGCC 
CAAACTATCA CAGTGACTGC TGTCAATGAT GATGTAATTG AAGGTACACA CACCAGCACG 
ATCGCCCACA ATGTTAGTAG TAGTGACACC AATTACAACG GAATTGCGAT CGCTAACATC 
AATATAAATA TTACCGACAA CGACGCACCA CCCAACACCA ATGTCAATGT CCAAATCACC 
GAGTATATGT ACACTGGTGC TAATGGTGAA TTCGTCGAGT TTACCAACCT TGGTACTACC 
GCAGTAGACT TTACTGGCTG GAGTTTTGAT GACAATACTC GCATTGCTGG TTCCTTCAAT 
CTCAGTGCAT TTGGTATCGT CCAGCCTGGG GAGTCGGTAA TTTTAACGGA AACTGCGGCG 
GAGACATTCC GTACTGCGTG GAACCTACCC ACCTCGGTAA AAATTATCGG TAACTCTAAC 
CAAGGTTTGG GACGCACTGA TGAGATTAAC CTGTATGACA GCACCGGCCA GCTAATAGAC 
CGCCTCACCT ACAATGATGA AGGATTCACC GGGACTATTC GCACCCAAAA CGCTAGCGGT 
TGGACGACAG CAGCGAATCT TGATGGTTTT GAGATTACTA CTAACTGGCA GCTTTCTGCC 
ATTAATGATG GTCAAAATTC CCGCTTGTCT ACAGGTAATG ATGTGGGTAA CCCAGGGACT 
TACATTCCTA ACCCTGTATC CACTGTGGGC GCGCCGAAAA TTGAAGTTAA TCCCAGTACA 
ACAGACTTAC TGGATGGGCA AAACCTACCT GTCCCCTTAC CTAAAATTGG TGCTGGTGCT 
ATTAGTGGTG TCATTAACGA TCCTACCGAC CCAGCAAGGA CATTAGGTAT TAACTTTACC 
TTGAGTGATA CTGACACGCC AGTTGAAAAC CTGACAATTA CAGTCACTAG TAGCAATCAG 
GCGGTTGTCC CTGATGCCAA CCTGACCTTA ACTGGTACTG GTGCAGAACG CAATCTAAAA 
ATTAATCCTG TTGGTGTTGG TTTAGCCAAT ATTACCGTTA CCGTGAGTGA CGGTACACTC 
AGCAGTGCCT ACATTATTAA CTACGCCGCC TCAGCCGGAT CTGTTAGTCC CAGTACCCGT 
TTCCTCACAG GGACAAGTGA CGCTTCTAGT GCGATCGCTA TTGATGCCAA TTATATGTTC 
GTTGCCGACG ACGAAGACCA AACAATTCGG CTGTACGATC GCCGTAATTC TGGTTTACCA 
TTAGCCAGCT TTGACTTTAC CTCATTACTC GGCTTATCTG GTTCCAGTGA AGTAGATATC 
GAAGCCTCTA CCCGCATTGG TAACACAATT TACTGGTTAG GTTCCCACAG CAACAACAGT 
AATGGCAGCG ATTCACCCAA CCGGGAACGG ATTTTTGCCA CGCAGATTTC TGGTACAGGG 
GCAAGTGCTA CCCTGACATT CCAAGGATAC TATCAATTCC TCGAAGATGA TTTAATTGCT 
TGGGATAATA ACAACGGTCA TGGTTTGGGC GCTGGCTTTT TAGGGCTGGC TGGAAGTGCT 
GCAAATGGTG TATCGCCTGA AATTCGCAAC GGTTTCAACA TTGAAGGCTT GACAGTTGCA 
CCCGATGGCA ATACGGCTTA TGTTTCCTTT CGTGCGCCTA ATCAACCAAC AAGCGATCGC 
ACTAATGCCC TAATTATTCC TGTCACTAAT TTTACCAATA TCCTGAATAC CACAGGCGGT 
ACATCTGGTG CTACTAGCTT TGGTGCGCCC ATCTTCTTGG ACTTAGGTGG TCGTGGTATC 
CGCAGTATTG AGCGTAACTC TAGTAATCAA TACCTGATTA TTGCTGGCCC CCCAGGTGGT 
GCTACAGGAG TAGCCCCCAA TGATTTCCGT CTCTACACTT GGACTGGTAA TGCTACTGAT 
GCGCCTGTAT TACGTATTGC TGATTTAACA GCGTTGAATA CTAACGGTAG TTTTGAATCC 
ATTGTGGAAG TGCCAGATTC CCTCACCAAC AATACCCAGA TTCAATTGCT GGTAGATAAC 
GGCGATACCG TTTGGTACAA CAACGGCACA ATTTCCAAAG ACTTAGCTCA GAATAACTTC 
CAAAAATTCC GCAGTGAAGT CATAACCCTT GGTTCTCCAG TCCTCACTCT ACCAGTCGGA 
GCAATTTCCC TCAAGACTCC TTACTCTCAA GAGTTTAATA ATCTGATTAG TTCGGGTTCA 
GAAACCTGGA CTGATAGCTC TACAATCGCT GGTTGGTATA CTGCTAGAAC CGGAACCGGC 
ACAACCATTG TCGCCTCAAC AGGAAGCAAC ACCGCAGGTA ATCTCTACAG CTTCGGTTTG 
GATAGTTCAG ACCGTGCTTT AGGTTCTATC GGTTCAGGTA ACGCAGCCGC AGGTACATTT 
TATTGGGGTA GCAGGTTTTT TAACGACACA GGTAATGTAG TTAATCAGCT GTATGTTAAC 
TATTACGGTG AACAATGGCG TAGTGGTGGT ACTACTTCTA ATCCTCAAAC CGTTGATTTC 
CAATATCAAA CCGGTGCAAC AAGCTTAACT GGTGGTACTT GGGTTGATGT CAACAATCTA 
GATTTTACTA GTCTGATCAA CAATACGACT GCTGGCGCAC TCAATGGTAA TGCAAGTGCC 
AACCGCAATC TAATCTCCGG CACAATTAGC GGTTTATCTC TCAATCCTGG TGAAGAAATT 
TGGTTACGTT GGGTCGATAT TGACCATCCA GGCACTGATC ATGGTTTGAG TATTGATGAT 
GTAAAAGTTT CCACTGCCCC ATTACCTAGC ATCACCTTAA TTGAGTCTGG TGGTAGCACC 
AACGTTACTG AAGGAGGGGC AACGGATACC TACACCATCG TCCTAAATAC CCAGCCCACA 
GCCAATGTTA CCGTTACCAT TAACCCTGAT TCTCAAACTA CTACTAGTGT CAATACTCTC 
ACCTTTACCC CTGCTAACTG GAATACACCC CAAACTGTAA CGATAACCGC AGTTAATGAT 
GACCTAGTAG AAGGCACACA CACCAGCGTG ATTACCCATA CAGTAACTAG TGACGATACT 
AGCTACAACG GAATTAACAT CGGCTCAGTT ACTGCCACAA TTACCGATAA TGATGTTGCC 
CTCACCATTA CCAAAATTCA CCAAATTCAA GGTAGTGGTA CAACCTTTAA CTCTGCTTTT 
GGTAGCATTC GCACAATTGA AGGTGTTGTG GTTGCTGCAT TCCCCGGTGG TTCAGGTTTA 
AATGGCTTTT TCGTCCAAGA AGAAGATGCA GACGCTGATA ATGACTCTAC AACTTCTGAA 
GGAATCTTTG TTTTCGACCC CACAGGCCAG TTCTCTGGTA GCGTTGGTGA TAAAGTCCGG 
GTGACTGGCA GTGTGAGCGA ATTTAGCACT AACAATGGTG TCAGCAGCCT GACCCAACTT 
TCTAGCGTCA GCAGCATCAT CAACTTAGGC GCAGACATAC TACCAACAGT GAGTAATATC 
CAGTTACCTG TGACGACTGT CGCAGATTTG GAACGCTACG AAGGGATGCG GGTAAATATC 
AGTGCTGGTA GTGGGGATTT AACTGTTACC GAACATTTTC AACTTGGTCG TTTCGGTCAG 
GTGGTTCTCT CTGCAACTGG TACTAGTAAC CAACTTGGTA CGGATGGCAG GCTGGAACAA 
TACACCCAAT TTAATGACCC CAGTGTTACT GGCTACGCTG CTTATTTAGA TGAGATTGCC 
AAACGACGGA TTATCTTAGA TGACGGTAGC AGCACACAAA ACCCAGCAAC CATCATCTTT 
GGTCGTGGTG GTGAACCTTT AAGTGCTACC AACACCCTAC GGGGTGGCGA TACCGTTGCT 
AGTATCACTG GCATTTTAGA CCACCGCTTT GAAGGATACC GCGTTCAAAC TTCAACAGGC 
GTAAACTTTA CACCAGCCAA TCCTCGTCCA ACAACCACAC CAGATGTAGG CGGTACACTC 
AAGGTTGCCA GCTTTAACGT CCTAAATTAC TTTAATGGTG ATGGTACTGG TAGCGGCTTC 
ACCAGTCCTG AACAAAGGGG TGCAGAAAAC CTGACTGAGT TCAACCGCCA GCGTGACAAG 
ACAATTGCAG CCATTCTGGG GTTAAATGCC GATGTTGTGG GTCTGATTGA AATCGAAAAT 
GATGGTTACG GTGCTAATAG TGCCATTCAA GATTTAGTCA ATGGACTCAA TGCTGTTGCC 
GGTGCGGGTA CTTACGCTTT TATTAATCCA GGACTGTCTC AACTAGGTAC GGATGCGATC 
GCCGTTGGTT TGATCTATAA ACCTAATAGT GTCACCCCCA TTGGTACAGC CGCCACAGTC 
GCCGATGGCT TTGGTCAAGG TGCGTTTGAT AACAATAACC GTAAACCCCT AGCCCAAACT 
TTCCGACAAA ACTCCACAGG TGAACAGTTC ACAGCCGTCA TCAATCACTT TAAATCTAAG 
GGTTCAAGTT TTGGAAATCC TGGCGACGCT GACGCTGGCG ATGGTCAAGG TTTATCTAAT 
GGAACACGGA CTCGTGCATC CCAAGATTTG GCAGCATGGT TAGCGACAAA TCCCACGGGA 
ACTACTGACA CAGATTATCT CATTCTCGGC GACCTCAACG CCTACGCCCA GGAAGATCCA 
ATCAGGGCTT TGGAAAATGC CGGATATAAC AACCTGTTGC CAAATACCAC CTATTCCTAC 
GTTTTTGATG GTCAGTGGGG TGCTTTAGAC CATGCTTTAG CTAATGCCTC ACTGACTGCA 
CAATTAAGTG GTGCTGTCAA GTGGCATATT AATGCTGATG AACCAAATGT TCTTGACTAC 
AACACCAACT TCAAGTCAGT AGGACAACAA ACCAGCTTAT ACAGTCCTGA TGCTTTCCGT 
TCTTCAGACC ATGACCCGGT GATTGTAGGG CTGAATTTAA ACACTGCACC CATAGCTGTG 
AATGATATAG CCACGACCAA TGAAAACACG GCTGTCAACA TTAACGTCCT GACTAATGAC 
AGTGATGCGA ATGGTGATGC TTTACAACTG AGTTTGGTAT CTAACCCTGT CAACGGTATT 
GCTGTTGTCA ATGACAATGG TACACCAGGT AACTTTGCTG ATGACTTTAT TATCTACACG 
CCCAATACTG GCTATGTTGG CAGTGACAGT TTCACTTATG GTATCAGTGA TGGTAAGGGT 
GGCACAGCCA CAGCATCTGT GAGTCTGACG ATCAACGCTA GTGGCGGCAT TATTGGTACT 
CCAGATAACG ATATTCTCAC AGGTACTAAT AGGAATGATC TCATCCGGGG TTTGGGTGGT 
AATGATTTAT TAATAGGTGG TAACGGTAAT GATACCCTCT ATGGTGACAG AGGCAAAGAT 
ATCTTACTAG GTGGTAACGG TAACGATACC CTGTATGGTG GTGACGGCAA TGATACCTTA 
ATCGGTGGTA ATGGAGATGA TTTGTTAGTT GGTGGTAAGG AAAATGACTT ATTGATTGGC 
GGTAACGGCC GCGATCGCTT CTATCTGAGT GATACTAGAA CTGGAGAGTT TGATATCATC 
ACTGATTTTA AAGTCGGGCA AGATACAATC TTCATCTCCA AGACAGAATT TGGACTTAGC 
CAAGCTTTGG GTACACTTAA TCCGGGTTTA TTCCGCTTGG GTAGTAATGC GACAGCAGCA 
GGCGATCGCT TCATCTACAA CAATACTACA GGCCAACTGT TTTTTGATGA AGATGGCATT 
GGCGGTGCAG CCAAAATTCA AATAGGTTTG TTATCTAATA AACCCGCAAT CACTAGTAGC 
AGTATTACTA TAGCTGCTTA A 

 

Protein sequence

MTATTLKPGD IAIAGYNTTN PDSIRVVVLV DIGAGTTFNI TDNGWQSSGS FRTGEGVLTY 
TAPQDISAGT VLTWTNGSSI NSPGFNSNNP SNFALNASGD SLIIYTGTLA SPTLIYSLSS 
GNWTNATSAS TSAEPTATNG GTLETGKTTV AITTNGTNGY YSGSTVGTQA QLLAAISNPA 
NWTASSTITD IANWRSSFTL SQPLPNIQIT EYMYQGTNGE FMEFTNLGTT AVDFTGWSYD 
DSGRTAGTVS LSAFGIVQPG ESVILTEASE ADFRAAWGLS ANVKVIGGLT RNLGRSDEIN 
LYDNNGQLID RLTYGDETFT GTIRTQTRSG WTEPGNLGAV TINTDWQLST VDDAQNSRTS 
TGGDIGNPGF YNINNTPLPG ITITQSGSST DVTEGGVTDS YAIVLKTQPT ADVTINITVD 
NQVTTSSPTL IFTPQNWNIA QTITVTAVND DVIEGTHTST IAHNVSSSDT NYNGIAIANI 
NINITDNDAP PNTNVNVQIT EYMYTGANGE FVEFTNLGTT AVDFTGWSFD DNTRIAGSFN 
LSAFGIVQPG ESVILTETAA ETFRTAWNLP TSVKIIGNSN QGLGRTDEIN LYDSTGQLID 
RLTYNDEGFT GTIRTQNASG WTTAANLDGF EITTNWQLSA INDGQNSRLS TGNDVGNPGT 
YIPNPVSTVG APKIEVNPST TDLLDGQNLP VPLPKIGAGA ISGVINDPTD PARTLGINFT 
LSDTDTPVEN LTITVTSSNQ AVVPDANLTL TGTGAERNLK INPVGVGLAN ITVTVSDGTL 
SSAYIINYAA SAGSVSPSTR FLTGTSDASS AIAIDANYMF VADDEDQTIR LYDRRNSGLP 
LASFDFTSLL GLSGSSEVDI EASTRIGNTI YWLGSHSNNS NGSDSPNRER IFATQISGTG 
ASATLTFQGY YQFLEDDLIA WDNNNGHGLG AGFLGLAGSA ANGVSPEIRN GFNIEGLTVA 
PDGNTAYVSF RAPNQPTSDR TNALIIPVTN FTNILNTTGG TSGATSFGAP IFLDLGGRGI 
RSIERNSSNQ YLIIAGPPGG ATGVAPNDFR LYTWTGNATD APVLRIADLT ALNTNGSFES 
IVEVPDSLTN NTQIQLLVDN GDTVWYNNGT ISKDLAQNNF QKFRSEVITL GSPVLTLPVG 
AISLKTPYSQ EFNNLISSGS ETWTDSSTIA GWYTARTGTG TTIVASTGSN TAGNLYSFGL 
DSSDRALGSI GSGNAAAGTF YWGSRFFNDT GNVVNQLYVN YYGEQWRSGG TTSNPQTVDF 
QYQTGATSLT GGTWVDVNNL DFTSLINNTT AGALNGNASA NRNLISGTIS GLSLNPGEEI 
WLRWVDIDHP GTDHGLSIDD VKVSTAPLPS ITLIESGGST NVTEGGATDT YTIVLNTQPT 
ANVTVTINPD SQTTTSVNTL TFTPANWNTP QTVTITAVND DLVEGTHTSV ITHTVTSDDT 
SYNGINIGSV TATITDNDVA LTITKIHQIQ GSGTTFNSAF GSIRTIEGVV VAAFPGGSGL 
NGFFVQEEDA DADNDSTTSE GIFVFDPTGQ FSGSVGDKVR VTGSVSEFST NNGVSSLTQL 
SSVSSIINLG ADILPTVSNI QLPVTTVADL ERYEGMRVNI SAGSGDLTVT EHFQLGRFGQ 
VVLSATGTSN QLGTDGRLEQ YTQFNDPSVT GYAAYLDEIA KRRIILDDGS STQNPATIIF 
GRGGEPLSAT NTLRGGDTVA SITGILDHRF EGYRVQTSTG VNFTPANPRP TTTPDVGGTL 
KVASFNVLNY FNGDGTGSGF TSPEQRGAEN LTEFNRQRDK TIAAILGLNA DVVGLIEIEN 
DGYGANSAIQ DLVNGLNAVA GAGTYAFINP GLSQLGTDAI AVGLIYKPNS VTPIGTAATV 
ADGFGQGAFD NNNRKPLAQT FRQNSTGEQF TAVINHFKSK GSSFGNPGDA DAGDGQGLSN 
GTRTRASQDL AAWLATNPTG TTDTDYLILG DLNAYAQEDP IRALENAGYN NLLPNTTYSY 
VFDGQWGALD HALANASLTA QLSGAVKWHI NADEPNVLDY NTNFKSVGQQ TSLYSPDAFR 
SSDHDPVIVG LNLNTAPIAV NDIATTNENT AVNINVLTND SDANGDALQL SLVSNPVNGI 
AVVNDNGTPG NFADDFIIYT PNTGYVGSDS FTYGISDGKG GTATASVSLT INASGGIIGT 
PDNDILTGTN RNDLIRGLGG NDLLIGGNGN DTLYGDRGKD ILLGGNGNDT LYGGDGNDTL 
IGGNGDDLLV GGKENDLLIG GNGRDRFYLS DTRTGEFDII TDFKVGQDTI FISKTEFGLS 
QALGTLNPGL FRLGSNATAA GDRFIYNNTT GQLFFDEDGI GGAAKIQIGL LSNKPAITSS 
SITIAA