Gene Ava_4723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4723 
Symbol 
ID3679703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5904865 
End bp5906877 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content46% 
IMG OID637720079 
ProductGAF sensor Signal transduction histidine kinase 
Protein accessionYP_325215 
Protein GI75910919 
COG category[T] Signal transduction mechanisms 
COG ID[COG4250] Predicted sensor protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CAACTTCCGT GCTGAGTGAT CTGCTACAGT CCCTACCTTA CCTGCGGCCT 
CAGCTATATT TCAAAGCTTC ATTGACGGCC CTTTCCCACG CGATGGAAGA TCAGGTGTTG
GCTGCGACTT TAGACCAGCC TTTAGTGATT GCTAGCTTTC AAAGAGAGAG ATTCTATCGC
CAAGAAGCTC ATCGCTATCA GCGATTGGCA CAACGTAGTA ATCAAATATA CGTTCTATCT
GCACCGGAAA CTGATTTTGC CAATAGCTCG GAATACTACG AAAAAGTAGC ATTTGAGCCT
GATGATGCTT TGAGTCAAGA GTGGCATTTG GTCGTAGTAG CTGACAATTA TGCTACTTGC
TTGGTCTGTA GGGAAAGCCT GGGTTCGATC GCCAAAAATC AGCAAATACC TGAGTTTAGT
CCTGGCCTAG ATATGGATGC AGGGCGACGC TTTGAAGGTA TTTGGACATC TGAAAGGGGA
GTAAGTATTA AAGCTGCCCA ACTGCTATTA GATAGGATTT TGGTTTATCG ACCAGACTTA
GCAAAAAAAG TGACAAAGGC TTGCCAGCGA TTTGGCATTG GCGAAAAGAA AATTTACTCC
AACGCTACTA GTGTTCTGAC TGAATATGCT TGTGATATTG ATACTGACCC TTTTGTGCAG
CGCTTAGTGA CTTACCTGCA AGCTAGTCAG TACAAGTTAC ATAAAGCTTA CCGTTCAATT
GCGGCTCAAG CACGAAAAGA ACGTTTAGTC AACTCAATTA GTACAGCAAT TCGGCGATCG
CTTGATCCCC ACCAAGTATT ACAAATCGCC GCCCAAGAAT TAGGACAACA TTTAGGAGCT
AGTCGTTGCC TAATTTATCG CGCCCAAGCC AGTGATGCCC AAGCTGTGAT CGAACATGAA
TTTTTAACCC CTGGGACAGT CTCAATTAGT GGTCAAACCT GGGAATTAAA AAACAATTCC
CTGTTTAAAG AGGTGGTAGA TCATGGCGAA GGTGTTTGTG TCACCGATAC CTTAAATGAC
TTCCGGATTA CAAATTCCCC CACATTGTCC TTAATTGCCA AAAAATTGGC GATTCGTTCT
TGGTTAATCG AACCAGTCGT ATTTCAAGGG AGATTATTAG GCATTGTAGA ACTGCATTAT
TGCGCCCTTC CGCCCCACCA ATGGCAGCCA GGAGAATTAG ATTTAGTAGA AGCGATCGCC
ACCCAAATTG GAGCCGCCTT AATTCAAGCA GAAGCTTACG CCAACCTGGA AGAACTCAAC
CAACAACTAG AAGCCCTAGA CCGTACCCGC AGCAACTTGA TAGCTATTAC TGGGCATGAA
CTCCGCACAC CTTTATCCAC AATTCAGGTG TGCTTAGAAA GTTTAGCTAC CGAACCAGAT
ATGCCCGTGG AATTGCAACA GGTAATGCTG AATACTGCGT TGTCGGACTC AGAACGGATG
CGAAAACTAG TGCAGGATTT CTTGACTCTC TCTAACTTAG AAAGCGGTCG AGTGGAATGG
CATCCAGAAT CCTTAACCCT GCAAGAGTGT ATCGATTTAG CCCTTAGTCG TCTCCGCATC
CGTCCTGGAG TCGAGAAACC ACCAGCGATT AAAACCCAAA TAGACGGAAA CTTACCCTTG
GTAAGAGCAG ACGGTGATTG GCTAGTAGAA GTGTTGGCAA AACTCGTAGA CAACGCTTGT
AAATTCACAC CCACACAAGG GGAGATCAAG ATTAGTGCCA CTCACAATGG TAGTCAAATG
GTAGAAGTCA CCGTAGCCGA TACAGGACGC GGTATCGAGC CAAATCGCTT AGAAATAGTT
TTTGACCGCT TCTACCAAGA AGAAGGGGCA TTAAGGCGCA CAGCAGGGGG TACAGGGCTA
GGTTTAGCAA TTTGCCGCCA AATCGTCAAC GGTTGGGGTG GCGCAATTTG GGCAGCTTCC
ACAGGTAAAG ACCAAGGTAG CCAATTTCAT TTCACTATCC CCATCGCCCA AAATAGTCAA
GAAGAAAGCT GGTCAAAAGT TAAAAGTCGT TAG
 
Protein sequence
MSISTSVLSD LLQSLPYLRP QLYFKASLTA LSHAMEDQVL AATLDQPLVI ASFQRERFYR 
QEAHRYQRLA QRSNQIYVLS APETDFANSS EYYEKVAFEP DDALSQEWHL VVVADNYATC
LVCRESLGSI AKNQQIPEFS PGLDMDAGRR FEGIWTSERG VSIKAAQLLL DRILVYRPDL
AKKVTKACQR FGIGEKKIYS NATSVLTEYA CDIDTDPFVQ RLVTYLQASQ YKLHKAYRSI
AAQARKERLV NSISTAIRRS LDPHQVLQIA AQELGQHLGA SRCLIYRAQA SDAQAVIEHE
FLTPGTVSIS GQTWELKNNS LFKEVVDHGE GVCVTDTLND FRITNSPTLS LIAKKLAIRS
WLIEPVVFQG RLLGIVELHY CALPPHQWQP GELDLVEAIA TQIGAALIQA EAYANLEELN
QQLEALDRTR SNLIAITGHE LRTPLSTIQV CLESLATEPD MPVELQQVML NTALSDSERM
RKLVQDFLTL SNLESGRVEW HPESLTLQEC IDLALSRLRI RPGVEKPPAI KTQIDGNLPL
VRADGDWLVE VLAKLVDNAC KFTPTQGEIK ISATHNGSQM VEVTVADTGR GIEPNRLEIV
FDRFYQEEGA LRRTAGGTGL GLAICRQIVN GWGGAIWAAS TGKDQGSQFH FTIPIAQNSQ
EESWSKVKSR