| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4716 |
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| Symbol | |
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| ID | 3679735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5892373 |
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| End bp | 5897799 |
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| Gene Length | 5427 bp |
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| Protein Length | 1808 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637720072 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_325208 |
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| Protein GI | 75910912 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.230197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAATTT CCCATAATAT TCAAGTATCT GGCTACAGAA TTTTAGAACT TGCCCATTCT
GGAGCCAACA CTAACATCTA CCGCGCTACA AAAGTGGATG GTAACACTCC CACCATTCTC
AAAGTCTTAA TAGACAATTA CTTTTCTCTA GAAGCAATTG TCAGATTTAA ACACGAATAT
TCTATCTCTG CTAACCTTGA CCATCCAAAT ATTGTCAAGG TTATCAGTTT GGAAACTCAT
CACAAACGAT TAGTAATAGT ATTTGAAGAT TTTGGTGGTA TTAGCCTCAA ACATTATCTT
TATAACCATC AGCCTTCTTT GCAACTGACT CTTCAAGTTG CCATCGCCAT CACCCGTGCT
TTAGTCTACA TTCACGACAA TAAAATCATT CATAAAGATA TTAAACCCGG CAATATCATC
ATTAAAAATT TAGGAACCAG GTTACAACAA ACGCCAGAAG TCTTGTCTAA CTTAATTATT
AAACTCACTG ATTTTAGCAT TGCTTCCCGT TTAAAAAAGG AAACGCCACA ACTTATCAAC
CCCAACCAGC TAGAAGGAAC ACTAGCTTAT ATGTCGCCAG AACAAACGGG ACGGATGAAC
CGTAACCTAG ATTACCGTAG CGACTTCTAT TCATTGGGAA TTACACTTTA CGAAATGCTG
ACGGGACAAT TACCGTTTAA CAGCAGTGAA CCCTTAGAAT TAGTACACGC TCATATTGCC
AAGGAGCCGA CACCCATACA GCAGCTAGCT GCAAACGTAC CCAATGCTGT TGTCGGTATC
GTCCACAAGT TAATGGCTAA AAATGCAGAA GATAGATACT ACTCTGCTCA AGGATTATTG
GTTGATTTAG AACAATGTTT AGAACAACTT AATCATACAG GAGCGATCGC TGATTTTACT
CCAGGTCGTC TAGATGTTTT CTCTCAGCTA ATTATTCCCC AAAAGCTATA CGGACGAGAG
ACCCAAGTTG AACAACTACT CCTTTCATTC GCACGAGTTA GCCGTGGTAA CAGTGAGTTA
ATATTAGTAT CCGGTTACTC CGGTATTGGT AAAACTTCCG TTATCAATGA AGTTAATAAG
CCCATCACTC AAGTTAAGGG ATATTTTATT AGCGGTAAGT TTGATCAGTT CAAGCGAGAT
ATACCTTATT TATCCCTCGT TCAAGCTTTT TCTTCCTTAA TGCGCCAACT CTTAACAGAA
TCTACAGAAA GACTAGAAAT GTGGCGCAGC AATATACTGC AAGCAGTTGG TAGTAATGGA
AAAGTAATTA TTGATGTCAT ACCAGAAGTC GAATTGATTA TTGGTAAACA ACCAGAAGTA
TCTCAACTAA GTCCTCATGA ATCACAGAAT AGATTTAATC AGATTTTTCA AAGTTTTATT
CAGGTTTTTT GCTGTTGTGG ACATCCATTA GTTATCTTCT TAGACGATTT GCAATGGGCA
GATTCGGCAA CATTAAACTT GATGGAGTCT TTGATTTGTG ACCAGACGAT TAAATATTTA
CTAATAATTG GAGCATATCG TGATAATGAA GTTAGCAAAC TTCATCCTCT AATCAGCACT
ATTGAAGAAA TTAAAAAATC TGGCATTATT ATCAACAACA TTGAGCTACA ACCGTTGGAT
CTAGCTAATG TAGTTCATTT TGTTCAAGAT ACCCTACATG ATAATACTAC CCGATGCTAT
CCTTTAGCTA CACTTGTTTT TAACAAAACT GCGGGAAATC CTTTTTTTAT TAATCAACTA
CTCAAGGCAT TACATCAAGA ATCACTACTT GTATTCGATT TTAATATACA GCAGTGGCAG
TGGGAAATTG AGAAAATTAT TACCGTTGGT CTTTCTGATA AGAGCGTAGT TGAATTAGTG
TGTAGCCGCA TTCAATTATT GCCAGAAAAA ACACAGAAAA TATTACAGTT AGCAGCTTGT
ATTGGCGACA ATTTTAACCT TTATGTCCTA TCATTAGTAA ATGAAAAATC GGTATTTGAT
ACTGCACATG AGCTTGATGA TGCTCTGCAA TGTGGTCTTA TTTTACCTTT GAGTGAGACA
TATCGTATAC CCCTACTATT TGACGCTCAA GATGATATTT TATTTGATAG TAAACAAATC
CTCTATAAAT TTTTACATGA TAGGGTACAA CAAGCTGCAT ATTCGTTGAT TCCTGAGAAT
CAAAAAAAAT ATACTCACCT TAAAATAGGT CGCTTATTGC TTAACAATAT CCAAGAAAAA
GATATAGAAA ACCATGTTTT TGATATTGTG AATCAGTTGA ATAAGAGTGT TGATCTTGTT
ATTGATGATT CAGAAAAAAA TAGACTAATA GAATTAAATT TCATTGCTGG ACATAAATCA
CAACAGGCAA CAGCCTATGA ACCTGCTCTT AGTTATTTCA TGATGGCTAT AAAACTTATA
GGTGAATCAT CATGGTTAAC TAATTACAAA ACTATCTTGA ATCTATATCA AGAAGCAACA
GAAGCGGCTT ATCTCTGTGG ACAGTTTGAT AAAATGCAGG GTTTGGCAAA TGTTGTGATT
AATAATGCTC ATAACTTACA AGAGAAAACC AAGGTTTATA ATCTAAAAAT TCTGACAGCT
ATAGCTCAAA AACAGTTGCA AGAAGCTTTG AGTCTTGGCT TGAATTTACT GAATCAACTA
GGAATTAATT TTCCAGAAGA GCCGACTGAT GATTTTGTTA ATCAAGTGCT ACTAGAAACC
AATTCCTTAA TCCCTAGAAA TAACATTCAA AGTCTGCTGC ACCTACCTGA GATGACTGAT
GTTAACTCGT TGGCTGCTAT GGATATTTTA GATACAATTT CCACTGCTGC TTATTCAGCT
TCTCCCAAGC TGATGCTGCT GATTAACTTG TCACGAGTGA AATTATCTTT AACTTATGGA
AACTCTGCTT CTTCTCCCAT AGCTTATGCA GCTTATGCGC TGATTTTGTG CGGTGTAATT
AATGATAGTG AATTAGGTTA TGAATTAGGC AAAGTAGCAC TGGATTTAAC AGCAGATTTA
AGCCCATTTA TCAAGGGCAA GATTTTATTT TATGTGAGTA ACTTTATTTT TCATTGGAAA
ACCCATCTTA GAGAAACTCT ACACTTTTCT AAAATGGGAG CGAAATACAG TCTTGAGGGT
GGAGATTTAG AATATACAGC ATGGTTTTAC CAATTTGGGT GTTGTTCTTT ATATTGGCAA
GGTGAGGAAT TAAGTAATCT AAAGCAGAAA ATAGAAAACG CCAATTGTGC TATTCGTCAA
ACAAAACAAG AACAACCATT AAGTCATCAA TATATGCTCT ATCAAGTTGT TGTAAACTTG
ATGGATAATT CTCAAGATGC TTGTTGTTTA ATTGGTGAAA ATTATAATGA ACAGGAATCT
CTCACACAAT ATGAAATTGT TAATGACTAC TTAGGGATTT ACTATTTTCA TTTATATAAA
ACCATTCTGA ATTATCTATT TGGTCAGCAT GAGCAAGCCA GGATTCATGC AGGTATAGCG
GCTCAAAATA TTAGTGGTGC TACGGCACAA TTTGTTGTGC CTATCTTCTA CTTTTATGAT
TCGCTGACAC AATTAGCAAT TTATACTAAT GAAGCCGAAT CTGGGCAACA ACGTATACTT
ACACAAGTAC AAAATAACCA GGAGAAGATG AGAAAATGGG CGGAATCCGC TCCCATGAAT
TTTTTACACA AATTCTATTT AGTCGAAGCA GAAATATATA AAATTCAGGG CAAAAACTAC
CAAGCTATGG ATTATTATGA CCGTGCTATT ACTCTTGCTC AAGAACAGGG TTATATCCAA
GAGATGGCGA TCGCCAATGA ACTAGCTGCT ATATTTTACT CACAATTGGG TAGGACAAAG
CTAGCTAAAA GCTATATGGA TGAAGCTCAT TATAATTATA TAAGTTGGGG GGCGATCGCC
AAAGCCAAAG ACTTAGAAAA ACGTTATTCT AATTTACTCA CGAGAACAGG GACGCTAACC
CAATCACATA TTACTCTTAC TAAAGGATCT ACAACTTCCA CAAGGAATCT ATCTCTAGAT
ATTTCCACAG TGGTTAAAGC CTCTCAAGCA CTAAGTAGCG AAATAGTTTT AGAAAAATTA
CTAGAAAAAC TTATGTTTTT AGCTAAGGAA AATGCAGGGG CGCAGAAGGT ATTTTTTATT
GCTAAAAAAG ATGAAAAATT AGTTATTGAA GGCTCATTAA TGGAGGAAGG AATTATTAAA
ACATTACAAG CCATACCCAT TACCAATAGT CAAGCATTAC CAGCCTCTGT AATTAATTAT
GTAAAAAGAA CTCAGGCACC TTTAGTTTTA GATGATGTAA CTCATGCTGA AGATTTCAAT
AAAGACCCTT ATATTATCAA TTATCGACCA AAATCAATAC TTGTATCACC AATTATTTCC
CAAGGGAAAC TGACGGGAAT TCTATATTTA GAGAATAATC TCACTAGTCA TGCTTTTACT
GAAGATAGAC TAGAGGTATT ACAAGTTTTA TCAGCACAAG CCGCTATTTC TCTAGAAAAT
ACGCGTTTAT ATTTAACATT AGAAACGCGG GTTCAACAGC GAACCCAAGA ACTAGAGGAT
AAAAATCATC AATTACAAAC TATTCTGGGG GAGCTACAAC GTACACAAGC CCAATTAATT
CATAATGAAA AAATGTCTTC ACTAGGGCAA TTGGTAGCAG GTGTAGCTCA TGAAATTAAT
AATCCTATCA ATTTCATTTA TGGTAATGTA ACTCACATCA AAGATTATAG TAAATCCTTA
CTAGATATTA TCGATTTTTA TCAAGCAGAG TACCCAGACT CTCAAGAAAC AATTCTGGAA
ATAGCGGATG AATATGATAT AGACTTTATT AAAGACGATA TGCCAAAGCT GCTCACTTCG
ATGAAAAACG GAGCAGAACG TATTCGTGAT ATAGTTATAT CATTACGCAA CTTCTCACGA
TTAGATGAGT CAGCAATTAA AGAAGTTGAT ATTCATGAAG GTATCGATAA TACCCTCATG
ATTTTGCAGC AAAGGCTACC AGATATTCAA ATTATCAAAG AATACGGCGA CTTACCTAAA
ATTACCTGTG ATGCTAGTCA AATAAATCAA GTTTTCCTGC ATCTGCTGAC TAACTCTATT
GATGCCCTAT TAGAAAGAAA AAATAAATGT AAATCATATC ACGGTCAAGA AATAAGTTTT
AGTCCAACAA TTTGGATTAG TTCAATTGTA GATGATACTA AACAAGCAGT TATTCGCGTT
ACGGATAACG GGATTGGCAT CGATGGTAAT ATTATAAGCA AAATATTTGA CCCGTTTTTT
ACCACTAAGC CAGTTGGTAA AGGTACAGGT TTGGGTTTAT CAATAAGTTA CCAGATTGTA
GAAAAACATC AAGGAAGTTT GGAGTGTCTG CCATCATTAA CAGATGGAAC GACTTTTATA
GTCAAGTTGC CAATCTCCTT AAAATAG
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| Protein sequence | MVISHNIQVS GYRILELAHS GANTNIYRAT KVDGNTPTIL KVLIDNYFSL EAIVRFKHEY
SISANLDHPN IVKVISLETH HKRLVIVFED FGGISLKHYL YNHQPSLQLT LQVAIAITRA
LVYIHDNKII HKDIKPGNII IKNLGTRLQQ TPEVLSNLII KLTDFSIASR LKKETPQLIN
PNQLEGTLAY MSPEQTGRMN RNLDYRSDFY SLGITLYEML TGQLPFNSSE PLELVHAHIA
KEPTPIQQLA ANVPNAVVGI VHKLMAKNAE DRYYSAQGLL VDLEQCLEQL NHTGAIADFT
PGRLDVFSQL IIPQKLYGRE TQVEQLLLSF ARVSRGNSEL ILVSGYSGIG KTSVINEVNK
PITQVKGYFI SGKFDQFKRD IPYLSLVQAF SSLMRQLLTE STERLEMWRS NILQAVGSNG
KVIIDVIPEV ELIIGKQPEV SQLSPHESQN RFNQIFQSFI QVFCCCGHPL VIFLDDLQWA
DSATLNLMES LICDQTIKYL LIIGAYRDNE VSKLHPLIST IEEIKKSGII INNIELQPLD
LANVVHFVQD TLHDNTTRCY PLATLVFNKT AGNPFFINQL LKALHQESLL VFDFNIQQWQ
WEIEKIITVG LSDKSVVELV CSRIQLLPEK TQKILQLAAC IGDNFNLYVL SLVNEKSVFD
TAHELDDALQ CGLILPLSET YRIPLLFDAQ DDILFDSKQI LYKFLHDRVQ QAAYSLIPEN
QKKYTHLKIG RLLLNNIQEK DIENHVFDIV NQLNKSVDLV IDDSEKNRLI ELNFIAGHKS
QQATAYEPAL SYFMMAIKLI GESSWLTNYK TILNLYQEAT EAAYLCGQFD KMQGLANVVI
NNAHNLQEKT KVYNLKILTA IAQKQLQEAL SLGLNLLNQL GINFPEEPTD DFVNQVLLET
NSLIPRNNIQ SLLHLPEMTD VNSLAAMDIL DTISTAAYSA SPKLMLLINL SRVKLSLTYG
NSASSPIAYA AYALILCGVI NDSELGYELG KVALDLTADL SPFIKGKILF YVSNFIFHWK
THLRETLHFS KMGAKYSLEG GDLEYTAWFY QFGCCSLYWQ GEELSNLKQK IENANCAIRQ
TKQEQPLSHQ YMLYQVVVNL MDNSQDACCL IGENYNEQES LTQYEIVNDY LGIYYFHLYK
TILNYLFGQH EQARIHAGIA AQNISGATAQ FVVPIFYFYD SLTQLAIYTN EAESGQQRIL
TQVQNNQEKM RKWAESAPMN FLHKFYLVEA EIYKIQGKNY QAMDYYDRAI TLAQEQGYIQ
EMAIANELAA IFYSQLGRTK LAKSYMDEAH YNYISWGAIA KAKDLEKRYS NLLTRTGTLT
QSHITLTKGS TTSTRNLSLD ISTVVKASQA LSSEIVLEKL LEKLMFLAKE NAGAQKVFFI
AKKDEKLVIE GSLMEEGIIK TLQAIPITNS QALPASVINY VKRTQAPLVL DDVTHAEDFN
KDPYIINYRP KSILVSPIIS QGKLTGILYL ENNLTSHAFT EDRLEVLQVL SAQAAISLEN
TRLYLTLETR VQQRTQELED KNHQLQTILG ELQRTQAQLI HNEKMSSLGQ LVAGVAHEIN
NPINFIYGNV THIKDYSKSL LDIIDFYQAE YPDSQETILE IADEYDIDFI KDDMPKLLTS
MKNGAERIRD IVISLRNFSR LDESAIKEVD IHEGIDNTLM ILQQRLPDIQ IIKEYGDLPK
ITCDASQINQ VFLHLLTNSI DALLERKNKC KSYHGQEISF SPTIWISSIV DDTKQAVIRV
TDNGIGIDGN IISKIFDPFF TTKPVGKGTG LGLSISYQIV EKHQGSLECL PSLTDGTTFI
VKLPISLK
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