| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4713 |
|---|
| Symbol | |
|---|
| ID | 3679732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5888274 |
|---|
| End bp | 5889326 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637720069 |
|---|
| Product | Sulfate ABC transporter, permease protein CysT |
|---|
| Protein accession | YP_325205 |
|---|
| Protein GI | 75910909 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0324829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.541075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAGGG TGGGCATCGC CCACCAACAC TCTGATACTT TTGGCAATGA TCATATAACG
CATAACTCAA AAATAAACAT AGTAATCCTA TGGGTAAAAT TTTTGAGCAA TTACCAATTA
CCAGTTACTA ATTACCAGCA CATCAAGCTA AATATTCTGT GTTTTTTTCA TTTTGAATTG
TTTATGACTT TATCTCCTAC TACGAAAGTA GACATTAAAA CTTCTAACTG GCAAGTGTTT
ATTCATAAAG TGGTGAATTT GCCTTGGACA TGGCGAATTA CTATTGGATA TTTAACGGTA
ATGTTATTTG TCCCCATCAT TGCCATGTTT CTCAAAGCCA GTACAGAATC ACCTGCTAGG
TTTTGGGAAA TAGCTACTAG TGAACTTGCA TTAGCAACAT ATAATGTTAC TTTTGTGACT
TCGTTACTTG CCGCTTTACT CAACGGTGTA TTTGGTACAT TGATAGCCTG GGTTTTGGTA
CGCTATGACT TTCCGCTTAA AAGAATAGTA GATGCTACCG TAGATTTACC CTTCGCATTG
CCAACGGCAG TAGCAGGTTT AACATTAGCA ACTGTTTACA GCGATAATGG TTGGATTGGT
TCTTTGTTAG CACCACTAGG GATTAAGGTA TCGTTCACCC GTTTGGGTGT CTGGGTAGCG
ATGGTATTTA TTTCCTTACC TTTTATAGTC AGAACAGTGC AACCTGTACT GCAAGAGATG
GAGCATGATG TTGAAGAAGC AGCTTGGTCT TTGGGTGCTT CTCAGTGGCA AACTTTCTCG
AAAGTGATAC TACCACCTTT GTTTCCCTCG ATTTTAACTG GTGTGGCTTT GGGTTTTTCC
CGTGCTGTTG GTGAGTATGG CTCGACTGTA ATTATTGCTT CTAACACACC CTTTCAAGAT
TTGATTGCAC CAGTATTGAT TTTCCAGAGG TTAGAGCAGT ACGACTATTC TGGTGCAACA
GTGATTGGTA TAGTCTTACT GACGATTTCT TTGGTAATGC TATTAGGAAT TAATCTGTTA
CAAGGGTGGT CAAGAAGATA TGACAATAAG TGA
|
|---|
| Protein sequence | MCRVGIAHQH SDTFGNDHIT HNSKINIVIL WVKFLSNYQL PVTNYQHIKL NILCFFHFEL
FMTLSPTTKV DIKTSNWQVF IHKVVNLPWT WRITIGYLTV MLFVPIIAMF LKASTESPAR
FWEIATSELA LATYNVTFVT SLLAALLNGV FGTLIAWVLV RYDFPLKRIV DATVDLPFAL
PTAVAGLTLA TVYSDNGWIG SLLAPLGIKV SFTRLGVWVA MVFISLPFIV RTVQPVLQEM
EHDVEEAAWS LGASQWQTFS KVILPPLFPS ILTGVALGFS RAVGEYGSTV IIASNTPFQD
LIAPVLIFQR LEQYDYSGAT VIGIVLLTIS LVMLLGINLL QGWSRRYDNK
|
|---|
| |