Gene Ava_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4712 
Symbol 
ID3679731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5887412 
End bp5888287 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content42% 
IMG OID637720068 
ProductSulfate ABC transporter, permease protein CysW 
Protein accessionYP_325204 
Protein GI75910908 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000236451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.214204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAA GTGAGCCGAA ACAGCACTCA TCTGGGACTA ATACAGACAA AGTTAAACCA 
CCACAAAAAA AGAGTTGGGT TCCCACAATT TTAATTTTTG TAGCGATCGC CTATTTAGCG
TTAATTCAAT ATATCCCGGC AATCAACGTT TTTGTCCAAG CTTTCAGTAA AGGAGTGGGG
CCATTTTTGG AGAACCTCAC CCATAGCGAC TTTCTTAGTG CTGCCAGATT AACTGTATTG
TTGGCATTAA TTGCCGTACC TTTAAATACA GTATTTGGTT TATGTGCAGC TTGGGCGATC
GCTCGTCATA AATTCCCTGG ACGTGCTTTA GTCTTAAGTA TTATTGACTT ACCCTTTTCT
ATCTCGCCCG TAGTTGCTGG CTTGATGCTG GTGCTGCTTT ATGGACGTAA TGGCTGGTTT
GGGCCTTTAC TGGAGGCAAA TGACATCAGA ATTATCTTTG CCTTTCCGGG GATGGTTTTA
GCCACAGCAT TTGTGAGTAT GCCTTTTGTC GCCCGTGAAG TAATTCCTGT TTTAGAGGAA
TTTGGTAAAG ACCAGGAAGA AGCCGCTAAA ACTTTGGGTG CCAATGAATG GCAGACATTT
TGGCGAGTTA CCCTACCAGG AATTCGCTGG GGCTTGCTAT ATGGCGTAAT TTTGACCAAT
GCTAGAGCAA TGGGTGAATT TGGTGCAGTC TCCGTAGTCT CAGGAAATAT CGCCAATAAA
ACCCAGAGTT TGCCATTGTT TGTAGAGGAT GCTTATAAAC AGTATGAAAC AGAAGCAGCT
TTTTCTGCGG CGGTACTTTT AGCACTACTA GCAGTAGTTA CCTTAGTATT GAAAGAGATT
GTAGAACGCA AAACTCGCAT TAAAGATGTG GATTAA
 
Protein sequence
MTISEPKQHS SGTNTDKVKP PQKKSWVPTI LIFVAIAYLA LIQYIPAINV FVQAFSKGVG 
PFLENLTHSD FLSAARLTVL LALIAVPLNT VFGLCAAWAI ARHKFPGRAL VLSIIDLPFS
ISPVVAGLML VLLYGRNGWF GPLLEANDIR IIFAFPGMVL ATAFVSMPFV AREVIPVLEE
FGKDQEEAAK TLGANEWQTF WRVTLPGIRW GLLYGVILTN ARAMGEFGAV SVVSGNIANK
TQSLPLFVED AYKQYETEAA FSAAVLLALL AVVTLVLKEI VERKTRIKDV D