Gene Ava_4710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4710 
Symbol 
ID3679729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5886521 
End bp5886874 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content47% 
IMG OID637720066 
Productmicrocompartments protein 
Protein accessionYP_325202 
Protein GI75910906 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000470001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.314593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC TACAGGCAGT GGGAGCATTA GAGACTAAGG GTTTTCCGGC TGTGTTAGCA 
GCAGCAGATG CTATGGTCAA AGCTGGCCGT GTCACCCTTG TGGGTTATAT CCGGGTTGGT
AGCGCTCGTT TTACAGTCAA TATCCGTGGA GATGTTTCGG AAGTTAAAAC GGCAATGGCG
GCTGGTGTGG AAGCCGCACA AAATGTTTAC GGTGGTACAT TAGAATCCTG GGTGATTATT
CCTCGTCCCC ATGAAAACGT TGAAGCAGTC CTACCTATTG GTTATACGGA TGCTGTTCAA
CAATATCGAG ATTCTGTAGA AAATCCCATT ATCCGTTCAT CCAACGGACG ATAA
 
Protein sequence
MSSLQAVGAL ETKGFPAVLA AADAMVKAGR VTLVGYIRVG SARFTVNIRG DVSEVKTAMA 
AGVEAAQNVY GGTLESWVII PRPHENVEAV LPIGYTDAVQ QYRDSVENPI IRSSNGR