Gene Ava_4708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4708 
Symbol 
ID3679727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5885018 
End bp5885905 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content42% 
IMG OID637720064 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_325200 
Protein GI75910904 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00337944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.50622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAA GTTTTTTACC TGCCGCAGTC GGGCAACTTA CTGAATCTGA ATCGATCGCC 
TTAGCTAAGA CTATTCAAAC TCAAGCGATC GCTACTCCCC TGAGTAATCA ACCAATCACC
ACAGCCTATG TACGTCAAGG TAGCGGTGGT ACACCAATTT TATTAATTCA TGGCTTCGAT
AGTTCTGTCT TAGAATTTCG TCGGCTTTTG CCACTGCTAG GGAAAGAGAA TGAAACTTGG
GCGGTGGATT TGTTGGGTTT TGGATTTACC CAAAGGCTTG CAGGGATAAA ATTTAGCCCT
GTTGCCATTA GAACTCACTT GTATTCCTTC TGGAAAACCC TGATTAACCA ACCTGTGATT
TTAGTTGGTG CTTCAATGGG GGGTGCAGCC GCGATTGATT TTACTCTGAC TTATCCAGAA
GCAGTTCAGA AACTAGTATT AATTGACAGT GCTGGCTTGC GAGGGGGTTC ACCGCTAAGT
AAATTCATGT TTCCCCCGTT GGATTATTTA GCAGCGCAAT TTTTACGTAG TCCAAAAGTG
CGCGATCGCG TTTCTCGTGC TGCTTACAAA AATCCGAACC TTGCTACTGT CGATGCTTTA
TGTTGTGGTG CATTACATTT AGAAATGCCT AGCTGGCCTG AAGCTTTAAT TGCTTTTACC
AAAAGTGGTG GGTACACAGC TTTTAGATTT AAGCAACTAG CAGAAATTAT CTCACCAACC
CTGATTTTGT GGGGTGATGC TGATAGGATT TTGGGTACGG AGGACGGTAA AAGATTTAAA
AGAGCAATTC CTCATAGCCA ACTGATTTGG ATTCAAGATT GTGGTCATAT TCCACATTTA
GAACAACCAG GAATTACGGC TCAACATATA CTAAGTTTCT GTAGTTAA
 
Protein sequence
MFPSFLPAAV GQLTESESIA LAKTIQTQAI ATPLSNQPIT TAYVRQGSGG TPILLIHGFD 
SSVLEFRRLL PLLGKENETW AVDLLGFGFT QRLAGIKFSP VAIRTHLYSF WKTLINQPVI
LVGASMGGAA AIDFTLTYPE AVQKLVLIDS AGLRGGSPLS KFMFPPLDYL AAQFLRSPKV
RDRVSRAAYK NPNLATVDAL CCGALHLEMP SWPEALIAFT KSGGYTAFRF KQLAEIISPT
LILWGDADRI LGTEDGKRFK RAIPHSQLIW IQDCGHIPHL EQPGITAQHI LSFCS