Gene Ava_4699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4699 
Symbol 
ID3679718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5871620 
End bp5872849 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content42% 
IMG OID637720055 
Productglycosyl transferase, group 1 
Protein accessionYP_325191 
Protein GI75910895 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.793347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGATGCTCTC TTCTACCTTT CCTTATCCGC CTAGCCGTGG TGGAACGGAA 
ATTAGAACTT TTAATTTACT TAAATACCTC CAGCAAAATC ATGATGTGAC TTTAGTGACG
CAGTATAACA AGAATGTGTC AGATACTGAA GTGGCAGAAC TACGTAAATA TGTCAGTGAA
CTGCTGATTT TTCCCTTACC ACCGGAACCC CAGTCGAAAA ATGCCATTGC TAAATTGTTA
GGGAAAACTG GACGCTTTCT AGAGTCAGTG GGGAAGGCGA CACCACCCAA TGTTCTTTAT
CGCTATTCGC CAGAAATTCA AGCTTTAGTT GATAGTTGCG TTCAAGCTCA AAAATATGAT
GTGATTACTT GTGAACATAG TGTCAATGAA ATTTATATTC GCCCAGAATT TCGTCATAGT
GTAACTACAG TTGTAGATGT TCACAGTTCA GTTTACGGCT GGATTCGTGA CCATTTAGAA
ATGGGTGCGG CGCAGAATGC AGTACGCGAT CGCCTATATC TTTCTCTGGT GCTGAAGCGT
TACGAAAGGC GATACTGTAG TAAATTTTCT CAGATTGTGG TGACAACACA AGACGATCGC
CAGGAATTTC TCAAACTCCG CCCCGATATT GATATTAAAG TCATTCCCAA CGGTGTAGAT
TTAGAATTAT TTCCCCATCG TTGCCAAGAC CCAGGTGGAC ATAATTTAAT CTTTGTGGGG
GCAATGGACG CTTCCCACAA TATCGATGCA GCGCGCTTTT TTGCTATGGA GGTCTTACCA
CAACTACAAA AGCGTTATCC TGACGCTACA TTTAGTATTG TCGGCGCTAG ACCAACACCA
GAAATTGAAA ATCTGAATAA TATTCCAGGG GTCATAGTTA CTGGTCGCGT GGCTTCGATG
GTAAATTATC TGCATCAATC TACGGTGTGT GTAGTGCCGT TACGCACAGG TTTTGGCATA
AAAAATAAAA CTTTAGAAGC AATGGCGGCT GGTGTGCCTG TAGTAGCTAG CGATCGCGGT
TTAGAGGGAT TAGCCGTTGA TGGTGATAAT ACAGCTTTAG CAGCATTGCG AGCTAATAAG
CCAGCAGAAT ATGTTGATGC TATTAGTCAA TTATTTGAGA ATCCCCAACT GCGATCGCAA
TTATCCCAAA ATGGCAGAAA ACTGGTGGAA GCTGAATTTA CCTGGGATAT AGCTGGTATG
CGTTATGAGC AAGTTTGTTT GAATAGGTAA
 
Protein sequence
MRILMLSSTF PYPPSRGGTE IRTFNLLKYL QQNHDVTLVT QYNKNVSDTE VAELRKYVSE 
LLIFPLPPEP QSKNAIAKLL GKTGRFLESV GKATPPNVLY RYSPEIQALV DSCVQAQKYD
VITCEHSVNE IYIRPEFRHS VTTVVDVHSS VYGWIRDHLE MGAAQNAVRD RLYLSLVLKR
YERRYCSKFS QIVVTTQDDR QEFLKLRPDI DIKVIPNGVD LELFPHRCQD PGGHNLIFVG
AMDASHNIDA ARFFAMEVLP QLQKRYPDAT FSIVGARPTP EIENLNNIPG VIVTGRVASM
VNYLHQSTVC VVPLRTGFGI KNKTLEAMAA GVPVVASDRG LEGLAVDGDN TALAALRANK
PAEYVDAISQ LFENPQLRSQ LSQNGRKLVE AEFTWDIAGM RYEQVCLNR