Gene Ava_4675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4675 
Symbol 
ID3679831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5840748 
End bp5841455 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID637720031 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_325167 
Protein GI75910871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA ACCGATCTGA AAAACCCATA GTAATCTCTC CATCTATCCT ATCAGCCGAC 
TTTAGCCGTC TAGGTGATGA AATTCGTGCT GTAGATGCAG CTGGAGCTGA TTGGATTCAT
GTTGATGTAA TGGACGGTCG TTTTGTACCT AATATTACGA TAGGTCCTCT GGTAGTGGAG
GCAATTCGTC CAGTTACAAA GAAACCTCTG GATGTCCACT TGATGATTGT GGAACCAGAA
AAGTATGTAG AAGATTTTGC TAAAGCAGGG GCTGATATCA TTTCTGTTCA TTGTGAACAT
AATGCTTCGC CACATCTGCA CCGCACCCTG GGACAAATCA AAGAATTAGG TAAACAGGCA
GGTGTCGTAC TCAATCCTGG TACACCTTTA GAACTCATTG AATATGTTCT AGAACTGTGC
GACCTCATAC TAATTATGAG CGTTAACCCC GGCTTTGGTG GTCAAAGCTT CATTCCTGGC
GTAGTACCCA AAATCCGCAA GTTGCGTCAA ATGTGTGATG AACGCGGTTT AGACCCCTGG
ATTGAAGTAG ATGGCGGACT AAAAGCTAAT AATACTTGGC AAGTTTTAGA AGCAGGCGCG
AATGCAATTG TGGCTGGTTC TGCTGTATTT AACGCTAAGG ATTATGCAGA AGCGATTACC
AATATTCGCA ACAGCAAGCG TCCGACACCA GAATTAGCTA AGGTTTAA
 
Protein sequence
MTQNRSEKPI VISPSILSAD FSRLGDEIRA VDAAGADWIH VDVMDGRFVP NITIGPLVVE 
AIRPVTKKPL DVHLMIVEPE KYVEDFAKAG ADIISVHCEH NASPHLHRTL GQIKELGKQA
GVVLNPGTPL ELIEYVLELC DLILIMSVNP GFGGQSFIPG VVPKIRKLRQ MCDERGLDPW
IEVDGGLKAN NTWQVLEAGA NAIVAGSAVF NAKDYAEAIT NIRNSKRPTP ELAKV