| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4671 |
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| Symbol | |
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| ID | 3679827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5833831 |
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| End bp | 5835744 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720027 |
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| Product | Terpene synthase |
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| Protein accession | YP_325163 |
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| Protein GI | 75910867 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.965623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACAC AAGACAGGGT ACAAGTCAAT TCTATTGCAG AGGCGATCGC AGCTAGTCAA
AAATATCTGC TATCACTACA AAATCCGACT GGTTACTGGT GGGCGGAGTT GGAATCGAAT
GTCACCATCA CGGCTGAGGT TGTTTTACTC CACAAAATTT GGGGAACAGA TAAAACTCGA
CCTCTACATA AAATAGAAGC TTACCTGCGA TCGCAGCAAA AGCAACATGG TGGTTGGGAA
CTATTTTATG GGGATGGGGG CGAACTCAGT ACATCGGTTG AGGCGTACAT GGCGCTGAAG
TTGCTTGGTG TACCTGCAAC CGACCCCGCC ATGATTCAGG CGCGAGATTT TATTCTCCAG
CGTGGTGGTA TCAGCAAAAC CCGCATTTTT ACCAAGTTTC ACCTCGCACT CATCGGCTGT
TACAACTGGC GTGGTCTTCC TTCCCTCCCA GCTTGGGTGA TGCTGTTACC CAATCAGTTC
CCTGTGAATA TTTACGAGAT GTCCAGTTGG GCACGTTCCA GCACTGTCCC ACTGTTGATT
GTCTTTGACC AAAAACCTGT TTATCAAGTC AACCCAGCCA TTACTCTAGA TGAGTTATAC
GCGGAAGGTG TAGAGAATGT CCGCTATGAA TTACCCCGTA GTGGCGACTG GACTGATTTA
TTTCTCACTT TAGATGAAGG CTTCAAGCTG GCGGAAAGTT TCAATTTTAT TCCCTTTCGA
GAAGAAGGTA TTAAAGCCGC CGAAAAGTGG ATTATAGAAC GCCAAGAGGC TACAGGCGAT
TGGGGGGGAA TTATTCCCGC CATGTTAAAT TCGATGCTGG CTTTGCGTGT TCTGGGTTAT
GCCACAAACG ACCCAATTGT AGAACGAGGT TTACAAGCCA TTGATAACTT TGCCATCGAA
ACAGCAGATT GTTATCGAGT CCAGCCTTGT GTGTCACCTG TGTGGGATAC AGCTTGGGTT
ATCCGGGCGT TGATTGACTC TGGTATGGCA CCAGACCATC CGGCTATAGT CAAGGCGGGA
GAATGGCTAT TACAAAAGCA AATTTTTGAC TATGGTGATT GGAACGTCAA AAATCGCCAA
GGTCAGCCAG GGGCTTGGGC TTTTGAGTTT GATAATCGCT TTTATCCAGA TGTGGATGAT
ACGGCTGTTG TCGTTATGGC ACTCCACGCC GCTAAACTCC CTCATGAACA ATTAAAACAG
AAGGCGTGCG ATCGCGCTCT CCAATGGGTA GCATCAATGC AGTGCAAACC AGGCGGTTGG
GCAGCTTTTG ATATTGATAA TGACCAAGAT TGGCTCAATG CCGTACCCTA TGGCGACTTA
AAAGCCATGA TTGACCCCAA CACAGCAGAT GTTACCGCCA GGGTAATCGA AATGTTGGGT
GCTTGTAATT TATCTATCGA TTCCCACGAC TTGGAACGGG CGCTGACTTA TCTATTAAAT
GAACAGGAAG CAGAAGGCTG TTGGTTTGGG CGTTGGGGCG TAAATTACAT TTATGGAACT
AGCGGCGTTC TCTGTGCCTT GGCTTTAATC AATCCGCAAA AATATCAACG CCATATTCAA
CAGGGGGCGA CTTGGTTAGT GGGTTGTCAA AACCCCGATG GCGGCTGGGG TGAAACTTGC
TTTAGCTACA ACGACCCCAG CCTGAAAGGT CAAGGTGACA GTACACCATC CCAAACAGCC
TGGGCGTTAA TTGGGTTGAT AGCAGCTGGC GAAGCTACTG GTAATTTTGC TCATGATGTC
ATTGAACGGG GAATTAATCA TCTGGTATCC ACTCAACAAC CAGACGGTAG TTGGTTTGAG
GCATACTTTA CCGGAACAGG TTTCCCCTGT CACTTTTATT TGAAGTATCA CTACTATCAA
CAGTACTTTC CTTTAATTGC CCTTGGTCGT TATCAAGCAA TTAACCCTCT TTAA
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| Protein sequence | MRTQDRVQVN SIAEAIAASQ KYLLSLQNPT GYWWAELESN VTITAEVVLL HKIWGTDKTR
PLHKIEAYLR SQQKQHGGWE LFYGDGGELS TSVEAYMALK LLGVPATDPA MIQARDFILQ
RGGISKTRIF TKFHLALIGC YNWRGLPSLP AWVMLLPNQF PVNIYEMSSW ARSSTVPLLI
VFDQKPVYQV NPAITLDELY AEGVENVRYE LPRSGDWTDL FLTLDEGFKL AESFNFIPFR
EEGIKAAEKW IIERQEATGD WGGIIPAMLN SMLALRVLGY ATNDPIVERG LQAIDNFAIE
TADCYRVQPC VSPVWDTAWV IRALIDSGMA PDHPAIVKAG EWLLQKQIFD YGDWNVKNRQ
GQPGAWAFEF DNRFYPDVDD TAVVVMALHA AKLPHEQLKQ KACDRALQWV ASMQCKPGGW
AAFDIDNDQD WLNAVPYGDL KAMIDPNTAD VTARVIEMLG ACNLSIDSHD LERALTYLLN
EQEAEGCWFG RWGVNYIYGT SGVLCALALI NPQKYQRHIQ QGATWLVGCQ NPDGGWGETC
FSYNDPSLKG QGDSTPSQTA WALIGLIAAG EATGNFAHDV IERGINHLVS TQQPDGSWFE
AYFTGTGFPC HFYLKYHYYQ QYFPLIALGR YQAINPL
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