Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4640 |
Symbol | |
ID | 3679855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5803521 |
End bp | 5804102 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637719996 |
Product | hypothetical protein |
Protein accession | YP_325132 |
Protein GI | 75910836 |
COG category | [S] Function unknown |
COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000409914 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.210935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT TTGATAATCA ATTACAAACA TTCCAGGCCA GCGATCGCCA AGAATGGCGG GAATGGTTGA CACAAAACTA TCAAACATCA ATTGGGGTAT GGCTAATTTA CTACAAAGTC AAAAGTGGTA AACCGAGTAT TAAATATAAT GAGGCAGTCA AAGAAGCCTT ATGTTTTGGT TGGATTGACA GTAAAGTTAA ATCCTTGGAC AAAGAACGTT ATATGCAGAT ATTTACCCCC CGAAAACCGA AGAGTGGATG GTCAAAATTA AATAAGCAAT ATATCCAAGA ACTTACTCTG CAAGGTTTGA TTACCGAGGC TGGTTTAGCG AAGATTACAG TTGCAAAACA AGACGGTTCA TGGACTATCT TAGATGCAAT AGAAGCATTA ATTATTCCCG ATGACTTACA ACAAGCCTTA GCAGCTAATG AAACAGCTAG TACATATTTT TTAGGATTAA GTAGCTCATC GAAGAAAAAT ATTCTTTTAC GGCTTGCCAG CGCTAAACGT CCGGAAACAA GGCTGAAGCG AATTGAGGAA ACTATAAATT TAGCATTACA AAACAAAATC ACCAAGTTAT AA
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Protein sequence | MPNFDNQLQT FQASDRQEWR EWLTQNYQTS IGVWLIYYKV KSGKPSIKYN EAVKEALCFG WIDSKVKSLD KERYMQIFTP RKPKSGWSKL NKQYIQELTL QGLITEAGLA KITVAKQDGS WTILDAIEAL IIPDDLQQAL AANETASTYF LGLSSSSKKN ILLRLASAKR PETRLKRIEE TINLALQNKI TKL
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