Gene Ava_4640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4640 
Symbol 
ID3679855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5803521 
End bp5804102 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content37% 
IMG OID637719996 
Producthypothetical protein 
Protein accessionYP_325132 
Protein GI75910836 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000409914 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.210935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT TTGATAATCA ATTACAAACA TTCCAGGCCA GCGATCGCCA AGAATGGCGG 
GAATGGTTGA CACAAAACTA TCAAACATCA ATTGGGGTAT GGCTAATTTA CTACAAAGTC
AAAAGTGGTA AACCGAGTAT TAAATATAAT GAGGCAGTCA AAGAAGCCTT ATGTTTTGGT
TGGATTGACA GTAAAGTTAA ATCCTTGGAC AAAGAACGTT ATATGCAGAT ATTTACCCCC
CGAAAACCGA AGAGTGGATG GTCAAAATTA AATAAGCAAT ATATCCAAGA ACTTACTCTG
CAAGGTTTGA TTACCGAGGC TGGTTTAGCG AAGATTACAG TTGCAAAACA AGACGGTTCA
TGGACTATCT TAGATGCAAT AGAAGCATTA ATTATTCCCG ATGACTTACA ACAAGCCTTA
GCAGCTAATG AAACAGCTAG TACATATTTT TTAGGATTAA GTAGCTCATC GAAGAAAAAT
ATTCTTTTAC GGCTTGCCAG CGCTAAACGT CCGGAAACAA GGCTGAAGCG AATTGAGGAA
ACTATAAATT TAGCATTACA AAACAAAATC ACCAAGTTAT AA
 
Protein sequence
MPNFDNQLQT FQASDRQEWR EWLTQNYQTS IGVWLIYYKV KSGKPSIKYN EAVKEALCFG 
WIDSKVKSLD KERYMQIFTP RKPKSGWSKL NKQYIQELTL QGLITEAGLA KITVAKQDGS
WTILDAIEAL IIPDDLQQAL AANETASTYF LGLSSSSKKN ILLRLASAKR PETRLKRIEE
TINLALQNKI TKL