Gene Ava_4639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4639 
Symbol 
ID3680009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5802963 
End bp5803511 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content39% 
IMG OID637719995 
ProductRNA 2'-phosphotransferase-like protein 
Protein accessionYP_325131 
Protein GI75910835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000460049 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.20738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAG CACGTCAAGT CAAAATCAGC AAATTCTTAA GTAAGCATTT GCGTCATACA 
CCAGAACGCC TTGGTTTGGT TTTGGCTCCT GGCGGTTGGG TAGCAGTTGA TGAGTTACTA
TCTGCTTGTG CATCCCATCA ATTTCCTATT TCTCGTGCAG ACTTGGAACA GGTTGTATCT
AACAATGATA AGCAGCGCTT CTCATTCGAT GAAACTGCAA CTAAAATTCG AGCCAATCAG
GGACATAGTG TGGAAGTAGA TTTGCAACTA CAACCACAAC TTCCACCACC AATTCTTTAT
CACGGTACAG GTGAAAAATC AGTACCAGCA ATCTTAAAAT CTGGATTGCT GAAAATGTCA
CGTCACCATG TGCATTTATC TAAAGATATA GAAACTGCCC GAACAGTAGG AATACGGCAT
GGTAAACCAG TTATATTTTC TGTTGATGCT ATGGTTATGT ATCAATCAGG ATTTACTTTT
TATTGTTCAG ATAATGGGGT TTATTTAGTG GATCATGTTC CACCTGAGTA TTTACATATG
ATGAATTAA
 
Protein sequence
MEQARQVKIS KFLSKHLRHT PERLGLVLAP GGWVAVDELL SACASHQFPI SRADLEQVVS 
NNDKQRFSFD ETATKIRANQ GHSVEVDLQL QPQLPPPILY HGTGEKSVPA ILKSGLLKMS
RHHVHLSKDI ETARTVGIRH GKPVIFSVDA MVMYQSGFTF YCSDNGVYLV DHVPPEYLHM
MN