| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4631 |
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| Symbol | |
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| ID | 3680000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5790847 |
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| End bp | 5795865 |
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| Gene Length | 5019 bp |
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| Protein Length | 1672 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719986 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_325123 |
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| Protein GI | 75910827 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.659803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0232391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATAG ATTATCAACG AACAAAAATT TTATTAATTG ATAATTCTTT GGAAAATTGG
CGCTGTTTGT CAGGTTTTTT AGCAGAAACA AAGTACTCAT TACAAAGGGT TAGCACTGCT
AAAATATCAA TCAGCAGTGT CAGTGAATTA ATGCCTGATC TAATTTTAAT AGATAGTTCT
ATTGATAAAA TAGACGGACT TTCTTTTTGC CAAAATTTAA AGGCGGAGAA GTCCCTCCAA
GACATATCTA TTCTCTTGCT CACTTATATT GAACAGCTTT CTGAATATAG CAGTTATTTT
CAAATAGGTG TATCTGACTT TATTAGTAAG CCATTACGCC AAGAAGAATT TTTGTTACGG
ATGAGAAATC AATTAAAAAT TCAAAGCAAA CAGAAAAATC AATTAGAAGA ACCTCATCAG
TCGTTTCCAG TTGTGGATGG TTTAATATCG TTGAATAACG CACTGAATCA AAATGTCATA
AGTAATAAAA AAGAATGTTG TTGGCAACTA TCAGAGTTAA ATAACGAAGA AAGTATTAAT
CAATCATTAA ACTCCCATTC GTTAGTAAGT AGTAACAGCA AGATTACAAG CTCAAAAAAC
AATACGCAGG AATACCAGAC TAATACTGTC AAGCTGTACA AACATAATTT AGTATTAACG
AAACTGGGAA AAAATCCAAT CCTATATCAA GGGAATTTAA AAACAGCCCT TGCAGAAATT
ACAAATGTTG CTGCTCATAA TTTAGGTATA GAGCGAGCAA GTATTTGGTT ATATGACGAA
ACACTTACTA AAATTCAATG TGCCGATCTA TTTGAATATA GTCGCAATCA ACACAGTGCA
GGAATGTCTT TATCAGCAAA AGATTATCCC ACTTATTTTC AAGCCTTGCA TCAAGATGAA
GCGATCGCCG CAGATGATGC TTATACAGAT CCGAGAACAA AAGAATTTGC TCAATCTTAC
CTCACCCCTT TGAATATCAC AGCCATGCTA GATACACCCA TTCGTCTAGC AGGTGAAACC
GTCGGGGTTT TATGTTTGGA AGCAGTAAAA TCACCTCATC ATTGGACACC CGAAGACCAA
AATTTTGCTC GTTCTTTAAC TAACTTAGTG TCCTTAGCCT TGGAAGCACG GGAACGCCAG
CGTGCAGAAG CAGCACATCG GATTTCCGAA CAAAAACTAG CATCAGCCTT TAGAGCATCT
CCTGACCCCA TTACTCTTTG TACTTATCCA GAAACACGTT ATATCGAAGT TAACGACAGT
TTTTGTCGCT TATTTGGTTA TTCTCGTTCT CAAGTCATTG GTAACACCGA TAAAGAATTA
AATATTTGGG TAAATCTAGA AGAGTGCAAT TTTCTGTCCC GAATTCTCGA AAAAGCCAAA
GCCATTCGCA ACCATGAAGT TGATTTTCGC ACTAGCAGTG GAGAAATTAA AACGACGCTG
TTTAGTGCGG AAATGATTGA AATTGATGGA CAAAAGTACA TCCTGGGTAC AGCAAAAGAT
ATTACAGAAC GCAAGCAAGC CGAAGCGGAA AGCCGTTTAT TACTATTAAC AACCCAAGCG
ATCGCCCGTG CAGTTGATGT GAAAAGCGCC TTAACCTTAG TATTGCGGGT AATTTGCCAA
ACCATTGGCT GGGATTTTGG GGAAGCATGG ACACCCAATC GTGAATCTCA TGTTTTAGAA
CATAGTTTGG TTTGTTACTG CGAGGAAGCA AGTTTAGAGG AATTTTGTCA CCAAAGTCAA
AATCTAAGAA TTGCACCGGG TGACGGACTA CCAGGACGAG TTTGGCAAAC CAAACAATCT
GAATGGATTG AAGATGTTTC TCAAGTCAAG CAAGGACAAT TTTTGCGATC GCCACAAGCA
GCCAAAGTAG GTTTAAAAGC AGGGTTTGGT ATTCCGATTC TTGCGGGAAA GGAAGTATTG
GCAGTTTTGA TATTTTTCAA GCGCAGTTCT ATCTCCATAG ATAAGCGTTT ACTCATGCTG
CTAGGTGCTG TTGCTACCCA ATTAGGTAGC TTGATTGAAC GCAAGTTAAT AGAATCTGCT
CACAGAAAGA GCGAAGAACG TTTACAACTA GCCTTAGAAG CCAGCGATTT AGGGTTATGG
GATTGGAATA TTGCCACAGG TAAAATTTAT CGGGACTGGC AATGGCAAAA GATGTTAGGT
TACGCACAAG AGGATATAGA AGATGACGAA CGAGTCATTC AGCAATTGTT ACATCCTGAA
GATTTAGCCG GAGTCACATC AGCCATCGCT GATCATTTGC AAGGTGTTAC TCCCGTTTAT
GAAATGGAAT TTCGGATGCG TTGCGCCGCC GGGGGTTGGA AATGGGTACA GTCTCGTGGC
CAAATTGTGG AACGCGACGA ACAAGGTCAG CCTTTACGGA TGACAGGTAC GACCAAAGAC
ATTACAGAGC GAAAAATTTT AGAAAAAGAA CTAGAATTGC GAGAAGCTCG TCTCAATGCC
TTTTTCAGTG GCGCTCCTGT GGGTATGAGC ATTTTCGATG ATCAACTACG GTTTGTGCAA
ATTAATGAGT TGATAGCAGA TATTCACGGT AAATCTGCTC AAGAACATAT TGGCAGGACT
CTGGAAGAGA TAGCACCCCA AATCGCCCCT CTAGTCACAC CATTCTGCCA ACAAGTACTC
TTAACCAGTC AACCAATTCT GAATGTAGAA TTGAGTCTGC CCGCAGTCAA CCAACCAGAT
AGCCTACGTC ACTTTTTAGT TTCTTATTTT CCCATTCCTG GGGAGGGTAA TCAGCTTTCT
GGTGTGGGTA AAGTGATAGT AGAAATTAGC GATCGCCAAC GAGCAGAAGA AGCTCTCAAA
GAAAGCGTCG AGAGGGAAAG AGCGATCGCC CAAGTCATTC AACGAATGCG CCAAACCCTA
GATTTAGATA CCATATTTAC TGCTACCACC GAAGAACTCA GACAGGTCCT CAACTGCGAT
CGCGCCGTAG TTTATCGTTT CGATTCCCAG GGGAGTGGTG AATTTGTCGC TGAATCTTGG
GGAAAAGATT GGATTTCCCT CATGGAAACA CATAAAAATG CACCCCATCT GACAGAAAAT
ACAGTGCAAG ACCAAAGTTG TCTGGCCAAG TTGTTAGAAT ACACTCCACA ATCTACCCCA
GACAAAAATT TTCTCTGCGT TTCCGACATT TATCAAGCTG GATTTGGTTC TTGCTACATT
GAATTTTTAG AGCGCTTGCA AGCAAAAGCG TATATTATTG TCCCCATTTT ATCTGGTGAT
CAAGTTTGGG GATTATTAGC AACTTACCAA AACTCTGGCC CTCGTCAATG GAAAACTGGC
GAAATTAACA TTGTCATTCA AATCGGTAAT CAGTTAGAAG TTGCTTTGCA GCAAGCACAA
CTGCTGACAC AAACCCAAAG ACAATCACAA GCCCTAGAAG CAGCTGCGAT CGCCGCAGAT
GGAGCAAACC GAGCCAAAAG CGAATTCCTC GCCAATATGA GCCACGAATT GCGGACACCA
CTCAACGCAA TTTTAGGCTT CACACAAATT ATGAGCCATG ACAAAACACT GTCAAAAGAC
AACCAACAGA ACCTAACGAT TATTAACCGC GCAGGAGAAC ATTTACTAGA CTTGATCAAC
GACGTTCTAG AAATGTCAAA AATAGAAGCG GGTAGAACCA CCTTAAACAT TAATAACTTT
GATTTAATTC ACCTCTTGGA TAACTTGCAA GAAATGATGC AAGGCCGAGC CAAGGCAAAG
GGTTTACACC TCCAATTTGA ATACGCCCCT AACATAGCCC AACATATCCA AGCTGACGAA
AGTAAACTAC GTCAAGTCTT ACTCAACATC TTAGGTAATG CCATCAAGTT TACCGAAACG
GGCAGTATCA TCTTACGGGT GAAGATGGGG GATGGGGACT GGGGACTGGT GAGTCAGCGC
GGTCTTCTCT ACGAGACACT GCGCGAAGGG GGTTTCCCCC ATGTTGGCGT TAGCCTTCCC
GTAAAGGTGC AACTGACGAA CTCCGAAGGA GGGACTGAGG ATGAGACAAA AACTCATCTC
TCAACACCTA ACACCCAATT CCCCATCACT AATCCCCGGT TCCTGATATT TGAAATACAA
GATACTGGCA TCGGCATCTG TGATGATGAA GTGGGTGTAT TGTTTGAAGC ATTTGGACAA
ACAGAAGCCG GTAGAAAATC TCAACAAGGT ACAGGATTAG GTTTAGCTAT TAGCCGTAAA
TACGTACAAC TGATGGGGGG TGATATTAGC ATTAGTAGTA CTGTGGGGGT GGGGAGTACA
TTTAGTTTTC GGATACAAGT GGGTTTAGTT TCTGCCCATG AAATTCCCTG TCAGCCTACT
GCACGCTCAG TCATCGGTTT AGCACCACAA CAACAAGAAT GTCGCATCTT GGTAGTGGAT
GATGTAGCAG ACAGTCGATT ATTGTTGGTG AAACTCCTGT CATCTGTTGG TTTTGTGGTG
CAAGAAGCTG CCAACGGTCA AGAAGCTCTG GCTATATGGC AACAGTGGCA TCCACAGTTA
ATCTTGATGG ATATGCGGAT GCCAATAATG GATGGTTATG AAGCCACCCA CTTCATTCGT
TCTGCTGAAA CAGAGAATCA CACCACCATA CCCAACCCCC ACACGATTAT CATTGCTTTG
ACTGCTCACG CTTTTGAAGA ACAACGCCAG GCAATGCTGC AAGTGGGCTG TGATGATTTA
ATTAACAAGC CGTTCTCCGA AAAAGAAATT CTAGAAAAGC TCAATAAATA CTTAGGAATA
AAATACCTTT ATCAAGAAGA CAGTTCTCAA ACACTAAAAG CTAGGACAAC AATATTTGCA
CATGATAATT TGTTGCCTTT GTTATCTACA TTACCAAGAG ATTGGGTAAT AAATTTATAT
AATGCTGCCG CCCAATGTAG CGATGATCTC ATTTTAAAGT TAACCGAAGA AATATCTTGC
GAAAATACTG CTTTGAAAGA GTATTTCGTA GATTTAGCCC ATAATTTCCA GTTTGAAAAA
ATTATGCAGA TAGTTAGTAC TATCAAAGAT GTTTCGTAA
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| Protein sequence | MLIDYQRTKI LLIDNSLENW RCLSGFLAET KYSLQRVSTA KISISSVSEL MPDLILIDSS
IDKIDGLSFC QNLKAEKSLQ DISILLLTYI EQLSEYSSYF QIGVSDFISK PLRQEEFLLR
MRNQLKIQSK QKNQLEEPHQ SFPVVDGLIS LNNALNQNVI SNKKECCWQL SELNNEESIN
QSLNSHSLVS SNSKITSSKN NTQEYQTNTV KLYKHNLVLT KLGKNPILYQ GNLKTALAEI
TNVAAHNLGI ERASIWLYDE TLTKIQCADL FEYSRNQHSA GMSLSAKDYP TYFQALHQDE
AIAADDAYTD PRTKEFAQSY LTPLNITAML DTPIRLAGET VGVLCLEAVK SPHHWTPEDQ
NFARSLTNLV SLALEARERQ RAEAAHRISE QKLASAFRAS PDPITLCTYP ETRYIEVNDS
FCRLFGYSRS QVIGNTDKEL NIWVNLEECN FLSRILEKAK AIRNHEVDFR TSSGEIKTTL
FSAEMIEIDG QKYILGTAKD ITERKQAEAE SRLLLLTTQA IARAVDVKSA LTLVLRVICQ
TIGWDFGEAW TPNRESHVLE HSLVCYCEEA SLEEFCHQSQ NLRIAPGDGL PGRVWQTKQS
EWIEDVSQVK QGQFLRSPQA AKVGLKAGFG IPILAGKEVL AVLIFFKRSS ISIDKRLLML
LGAVATQLGS LIERKLIESA HRKSEERLQL ALEASDLGLW DWNIATGKIY RDWQWQKMLG
YAQEDIEDDE RVIQQLLHPE DLAGVTSAIA DHLQGVTPVY EMEFRMRCAA GGWKWVQSRG
QIVERDEQGQ PLRMTGTTKD ITERKILEKE LELREARLNA FFSGAPVGMS IFDDQLRFVQ
INELIADIHG KSAQEHIGRT LEEIAPQIAP LVTPFCQQVL LTSQPILNVE LSLPAVNQPD
SLRHFLVSYF PIPGEGNQLS GVGKVIVEIS DRQRAEEALK ESVERERAIA QVIQRMRQTL
DLDTIFTATT EELRQVLNCD RAVVYRFDSQ GSGEFVAESW GKDWISLMET HKNAPHLTEN
TVQDQSCLAK LLEYTPQSTP DKNFLCVSDI YQAGFGSCYI EFLERLQAKA YIIVPILSGD
QVWGLLATYQ NSGPRQWKTG EINIVIQIGN QLEVALQQAQ LLTQTQRQSQ ALEAAAIAAD
GANRAKSEFL ANMSHELRTP LNAILGFTQI MSHDKTLSKD NQQNLTIINR AGEHLLDLIN
DVLEMSKIEA GRTTLNINNF DLIHLLDNLQ EMMQGRAKAK GLHLQFEYAP NIAQHIQADE
SKLRQVLLNI LGNAIKFTET GSIILRVKMG DGDWGLVSQR GLLYETLREG GFPHVGVSLP
VKVQLTNSEG GTEDETKTHL STPNTQFPIT NPRFLIFEIQ DTGIGICDDE VGVLFEAFGQ
TEAGRKSQQG TGLGLAISRK YVQLMGGDIS ISSTVGVGST FSFRIQVGLV SAHEIPCQPT
ARSVIGLAPQ QQECRILVVD DVADSRLLLV KLLSSVGFVV QEAANGQEAL AIWQQWHPQL
ILMDMRMPIM DGYEATHFIR SAETENHTTI PNPHTIIIAL TAHAFEEQRQ AMLQVGCDDL
INKPFSEKEI LEKLNKYLGI KYLYQEDSSQ TLKARTTIFA HDNLLPLLST LPRDWVINLY
NAAAQCSDDL ILKLTEEISC ENTALKEYFV DLAHNFQFEK IMQIVSTIKD VS
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