Gene Ava_4622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4622 
Symbol 
ID3679991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5782068 
End bp5782760 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content32% 
IMG OID637719977 
Producthypothetical protein 
Protein accessionYP_325114 
Protein GI75910818 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.118629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG TTTTCTTTTG TCCTGAAGAG TCTAATTTCT ACTCAAACTG CGTAGAAAAT 
TTTATTCTCA GGAATAGTGA TCAATCTGAT GCCATTATTG AATTTGGTTC TGGTGATGGT
AGCCCTGTAA TTAACTCATT ATTAAGAAAC CAGTTCAATG GTGTTATATA TGGTTTTGAG
TTAAATACCT CTGCGTGGAA AACCGCAAAT TTAACGATTG ATGAATATAA TCTTACTGAT
AAATATGTAG TTAACAACTC CAGCTTATTT GAAGCTAGTA CACCTGAAGC TAACTATCTA
ATCGCCAATC CGCCATATTT ACCAGCACCA GATGCCGATA TTTATATGCC CTTATTATTT
GGTGGTGAAG ATGGGGCGAC AGTTACTAAT GATCTTTTAT GTTTAGGTTA TGAAAATGCT
TTACTTTTAG TCTCTAGCTT TTCTAATCCT ATCAGTACAA TTAAGCAGGC ACAAAATAAT
GGATATAACG TTAGTAACTT TATAATTCTC CCATTAAAAT TTGGTTACTA TAGCTCAGAA
ACAAAAGTTA AAAATCATAT AGAAAAACTA CGAAAAAATA ATATGGCGTT TTATTCTAGA
GAATATTATT TTTTGGCTGG TGTTTTATTC CAAAAAAAAG CATCTGTGAT TGATTTATCT
CAAGAGTTAA CCCAAGTGAT GACGAGTTTA TAA
 
Protein sequence
MKDVFFCPEE SNFYSNCVEN FILRNSDQSD AIIEFGSGDG SPVINSLLRN QFNGVIYGFE 
LNTSAWKTAN LTIDEYNLTD KYVVNNSSLF EASTPEANYL IANPPYLPAP DADIYMPLLF
GGEDGATVTN DLLCLGYENA LLLVSSFSNP ISTIKQAQNN GYNVSNFIIL PLKFGYYSSE
TKVKNHIEKL RKNNMAFYSR EYYFLAGVLF QKKASVIDLS QELTQVMTSL