| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4616 |
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| Symbol | |
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| ID | 3679966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5773719 |
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| End bp | 5776013 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637719971 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_325108 |
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| Protein GI | 75910812 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.490681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CCACGATCGC TCCTGAACAG GTTAACCGCA TCGTCTGGAA CCAGCATCAT
GATCCTTTTG AAATCCTCGG TTCTCATCCC ATAGAACAAA ACGGCAAAAA CGTTTGGGTT
GTGAGAGCCT ACCTACCAAA TGCCAGTGCA GCATGGGTCG TTCTTCCAGA ACAACGGCAA
GAATACGCCA TGCAGACGGT GCATGATCCA CACTTTTTTG AATGTATTAT TGAAACTTCC
GAACTATCAA ACTACCAGTT AAAAACTAAA GAAGGAGAAC ATGAGCGTGT TTCCTACGAT
CCTTACGCTT TTCGTTCCCC TCGTTTAACA GACTTTGACT TACATTTGTT TGCTGAAGGT
AATCACCATC GCATTTACGA AAAACTGGGA GCGCATTTCA CAGAAGTAGA TGGCGTTACA
GGTGTTTACT TTGCAGTCTG GGCCCCCAAT GCTCGAAATG TCTCTGTTTT GGGAGATTTC
AACCTCTGGG ATGGACGTAA ACATCAGATG CGTAAAGGCG CTACTGGCGT TTGGGAATTA
TTCATTCCCG AAATCGGGGT AGGGGAGCAT TACAAATACG AAATCAAAAA TTTTGCAGGG
CATATTTATG AAAAATCCGA CCCCTTCGGT TTTCAACAAG AACCCCGCCC CAAAACAGCC
TCAATTGTTA GTAACTTAAA TTCATACAAC TGGAGTGACG AAAACTGGTT AGAACAGCGC
CGTCATACAG ATCCTTTAAC CCAGCCGATT TCAGTTTATG AAGTACACCT GGGTTCTTGG
TTACACGCTG CTAGTGCAGA ACCAGCTAAA CTACCTAATG GTGAAACTGA GCCTGTAGTC
ATTGCTTCAG AACTCAATCC AGGCGCACGT TTTTTAACAT ATCGGGAACT AGCCAGCAGA
CTCATTCCCT ATGTTAAAGA ACTAGGATAT ACCCACATAG AATTATTACC AATCGCCGAA
CATCCTTTTG ATGGGTCTTG GGGTTATCAG GTAACAGGAT ACTACGCCCC TACTTCGCGT
TTTGGGACTC CTGAAGACTT TATGTATTTT GTTGATCAGT GTCACCAAAA CAACATCGGT
GTAATTGTCG ATTGGGTTCC TGGTCACTTC CCCAAGGATG GGCATGGTTT AGCCTTCTTT
GATGGTACTC ACCTATATGA ACACGCCGAC TCCCGTAAAG GTGAACATAA AGAGTGGGGG
ACTCTGGTTT TCAATTATAG CCGGAACGAA GTCCGCAACT TTTTGGTAGC AAATGCCCTG
TTCTGGTTTG ACAAATACCA CATAGATGGT ATTCGTGTTG ATGCGGTGGC TTCCATGCTT
TATCTCGACT ACTGTCGCAA AGAGGGCGAA TGGTTGCCTA ACCAGTACGG TGGTAGAGAA
AATCTAGAAG CAGCAGATTT TCTGCGTCAG GTAAATCACT TGCTTTTTAG CTATTTTCCT
GGTGTGCTTT CCATTGCGGA AGAATCCACA GATTGGCCGA TGGTGTCTTG GCCTACCTAC
ACAGGTGGTT TAGGATTTAA CCTCAAGTGG AACATGGGCT GGATGCACGA TATGCTGGAT
TATTTCAGCA TGGACCCTTG GTTTAGGCAA TTCCACCAAA ACAACGTCAC CTTTAGTATG
TGGTATAACC ACAGTGAGAA CTTCATGCTG GCTCTATCCC ATGATGAAGT CGTACATGGT
AAGAGCAATA TCATCGGTAA AATGCCTGGT GATAAGTGGC AGAAGTTGGC AAATGTGCGT
TGTCTGTTTG CCTATATGTT TGCTCACCCA GGTAAGAAAA CCATGTTTAT GAGCATGGAA
TTTGGGCAAT GGAGTGAGTG GAATGTTTGG GCTGACTTGG AGTGGCCTTT GTTACAGTTT
GAACCACACC AACAGTTGAA AAAATTCTTC ACTGAACTGA ATAAACTTTA CCGTTCTGAA
CCTGCTTTAT ACACTTTAGA TTTTGCTAGA GAAGGGTTTG ATTGGATTGA TTGTAGCGAT
AATCGCCACA GCGTAGTCTC GTTTATTCGC CGTGAAAAAG ATACTGAGAA TTTCGTTGTG
GTGGTTTGTA ACTTCACACC CCAGCCTCAT TCTCATTACC GTATTGGTGT CCCAGAAAAA
GGTTTTTACA CCGAGTTATT CAATAGTGAT GCTCGTCAGT ATGGCGGTAG CAACATGGGT
AACTTAGGTG GTAAGTGGAC TGATGATTGG TCGATGCACA GTCGCCCCTA TTCACTGGAT
TTATGTTTAC CACCTCTGGG AGTTTTGATT TTGAAGATGG ATAAGGAAAA AACGGCTAAA
GCATCAGGTT CTTAA
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| Protein sequence | MPMTTIAPEQ VNRIVWNQHH DPFEILGSHP IEQNGKNVWV VRAYLPNASA AWVVLPEQRQ
EYAMQTVHDP HFFECIIETS ELSNYQLKTK EGEHERVSYD PYAFRSPRLT DFDLHLFAEG
NHHRIYEKLG AHFTEVDGVT GVYFAVWAPN ARNVSVLGDF NLWDGRKHQM RKGATGVWEL
FIPEIGVGEH YKYEIKNFAG HIYEKSDPFG FQQEPRPKTA SIVSNLNSYN WSDENWLEQR
RHTDPLTQPI SVYEVHLGSW LHAASAEPAK LPNGETEPVV IASELNPGAR FLTYRELASR
LIPYVKELGY THIELLPIAE HPFDGSWGYQ VTGYYAPTSR FGTPEDFMYF VDQCHQNNIG
VIVDWVPGHF PKDGHGLAFF DGTHLYEHAD SRKGEHKEWG TLVFNYSRNE VRNFLVANAL
FWFDKYHIDG IRVDAVASML YLDYCRKEGE WLPNQYGGRE NLEAADFLRQ VNHLLFSYFP
GVLSIAEEST DWPMVSWPTY TGGLGFNLKW NMGWMHDMLD YFSMDPWFRQ FHQNNVTFSM
WYNHSENFML ALSHDEVVHG KSNIIGKMPG DKWQKLANVR CLFAYMFAHP GKKTMFMSME
FGQWSEWNVW ADLEWPLLQF EPHQQLKKFF TELNKLYRSE PALYTLDFAR EGFDWIDCSD
NRHSVVSFIR REKDTENFVV VVCNFTPQPH SHYRIGVPEK GFYTELFNSD ARQYGGSNMG
NLGGKWTDDW SMHSRPYSLD LCLPPLGVLI LKMDKEKTAK ASGS
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