Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4610 |
Symbol | |
ID | 3679960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5766563 |
End bp | 5767849 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719965 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_325102 |
Protein GI | 75910806 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.861127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCTA AAGTAATAAT AAACATAGTT TCCTCGCTCA AGGCCATGCA AAACCAAGTA CACGATGAAT CTCAACCCTT AAATCCTAAA AACCAGAATC ACGCACCTTG GAAAAAAGCG GCTGCATCTC TATCACTAGT ACTGCTGGGA TCTGGTATGA CTTTAGCTGG TGGATATTTA GCAGGAAACC AGCAACAATT GGCACAAAAA GCATCTGACT TGGCCGTGAG CCGAGTAGAT GCAGCACCGC CATTAGGAAA TAACACAGAC CCCAACTTTG TAACTCAAGT AGTACAGAAA GTTGGGCCGG CTGTTGTGCG TATTGAAGCG TCTCGGACTG TCACATCTCG ATTACCAGCC GAATTTAACG ATCCATTTTT CCGTCGCTTC TTCGGTTCCC AACTACCTCA ACAACAAGAG AGAGTACAAC GGGGTACTGG TTCCGGGTTT CTTATTAGTG CTGATGGTAG TATTCTTACC AATGCTCACG TTGTTGATGG TGCAGATACG GTGCGAGTCA TCCTCAAAGA TGGGCGCAGT TTTCAGGGTA AGGTATTAGG TACAGATAAT TTAACAGATG TAGCTGTTGT CAAAATTCAG GCAAATAACT TGCCGACCTT AGCAGTGGGT AATTCTGACC AATTACAACC TGGACAATGG GCGATCGCTA TTGGTAATCC TTTAGGTTTA GATAACACCG TCACCACAGG TATAATTAGT GCAACTGGAC GTACCAGCAA TCAAATTGGC GCACCAGATA AGCGTGTAGA ATATATTCAA ACTGACGCAG CAATTAATCC AGGTAACTCT GGTGGCCCCT TGCTGAACTA TCGTGGTGAA GTTATTGGGA TGAATACCGC CATTATTCAA GGCGCGCAGG GTCTAGGTTT TGCCATCCCT ATCAAAACAG CACAGCGTAT TTCTAATCAA CTTATAGCCA CAGGTAAAGT ACAGCATCCT TACCTGGGTA TTCAAATGGT AGGATTAACA CCCCAAGTCA GACAAAACAT TAACTCTGAC CCCAATAGTG GTTTGAGTGT TGATACAGAC AAGGGTGTTT TAGTGGTCAG AGTCATGCCA AATTCGCCAG CCGCAAGAGC AGGGTTACGC GCTGGCGATG TTATTCAAAA GCTGAACGGC CAATCTGTTA CGGATGCTAG TAATGTACAA AGAGCCGTAG AGAACGCTCA AGTCGGTGGA CAATTGCAGC TAGAATTATG GCGCAATGGT CGAAATGTTA ACTTAGCTGT ACAAGCAGGC GCTTTCCCGA CTCAACAGGT GGAATAG
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Protein sequence | MLSKVIINIV SSLKAMQNQV HDESQPLNPK NQNHAPWKKA AASLSLVLLG SGMTLAGGYL AGNQQQLAQK ASDLAVSRVD AAPPLGNNTD PNFVTQVVQK VGPAVVRIEA SRTVTSRLPA EFNDPFFRRF FGSQLPQQQE RVQRGTGSGF LISADGSILT NAHVVDGADT VRVILKDGRS FQGKVLGTDN LTDVAVVKIQ ANNLPTLAVG NSDQLQPGQW AIAIGNPLGL DNTVTTGIIS ATGRTSNQIG APDKRVEYIQ TDAAINPGNS GGPLLNYRGE VIGMNTAIIQ GAQGLGFAIP IKTAQRISNQ LIATGKVQHP YLGIQMVGLT PQVRQNINSD PNSGLSVDTD KGVLVVRVMP NSPAARAGLR AGDVIQKLNG QSVTDASNVQ RAVENAQVGG QLQLELWRNG RNVNLAVQAG AFPTQQVE
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