Gene Ava_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4600 
Symbol 
ID3679989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5755094 
End bp5755570 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content45% 
IMG OID637719955 
Productnitrogen-fixing NifU-like 
Protein accessionYP_325092 
Protein GI75910796 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.357598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT TAGAAGATTT AGTGACAGAA ATTAGCCGCT ATGAAGCAAT TATCTCACAG 
TGGGATGAAA CTCAGCGTGG GGTGGTAGTT GGGTTGAAAA GGGCGATTGA GGATTTACAT
CAGGAAGCTT TGAGGCGGTT AATTAAAAGT GTGAAGCAGG AATGTTTACT AGCTTTACAA
AATGCGGTGC AAGATGAGGT GGTTTACGGG GTTCTACTTT ATCATGGGTT GGTGAAACAG
CCCCAACCAC CGCTTTTACA ACGTGTGGAA GCTGCGTTGG AGGAGGTGCG TCCAGGGTTG
AAAAGTCATC ATGGGGATGT GGAGTTAGTG GCAATTAAAC CACCAGATAC GGTAGAGGTG
CGGTTTATCG GGACTTGTAG TAACTGTGCG GCTTCTACTT TGACGTTATC TCAAGGGGTG
GAACAGGCTA TTAAGGCGCT GTGTCCAGAA ATTATGACGG TGATTGCTGT GAAGTAA
 
Protein sequence
MTNLEDLVTE ISRYEAIISQ WDETQRGVVV GLKRAIEDLH QEALRRLIKS VKQECLLALQ 
NAVQDEVVYG VLLYHGLVKQ PQPPLLQRVE AALEEVRPGL KSHHGDVELV AIKPPDTVEV
RFIGTCSNCA ASTLTLSQGV EQAIKALCPE IMTVIAVK