Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4581 |
Symbol | |
ID | 3680048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5736152 |
End bp | 5737195 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719936 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_325073 |
Protein GI | 75910777 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACAA ACTCGCAAAC CCCAACGGTA AAGGCAAAAA TATCCCCGTC TCTACCAGCC ACTGACGCTA AAGCTAGAGT CAGTAATTTT ATGAAACAGT TGCAAGATGA AATTACACAA GCCTTAACAA AACTTGATGG TGTGGGTCAG TTTCATGAAG ATAGTTGGGA ACGTCCTGAG GGGGGTGGCG GGCGATCGCG TGTGCTACGT GATGGTGCAA TATTTGAGCA AGCTGGGGTA AATTTTTCTG AAGTTTGGGG TTCTCATCTC CCTCCTTCAA TTTTAGCCCA GCGTCCTGAA GCGGAAGGAC ATGGCTTTTA TGCCACAGGT ACATCGTTGG TTTTACATCC ACGCAACCCC TATGTTCCCA CAGTTCACCT AAATTACCGT TATTTTGAAG CTGGCCCAGT TTGGTGGTTT GGTGGCGGTG CTGACCTCAC ACCTTATTAC CCCTTTGCAG AAGATGCGGC TCATTTCCAT CAGACCCTGA AGGGAGCTTG TGACGAACAT CACCCAGAGT ATTACCCAGT CTTTAAACGC TGGTGTGATG AATACTTCTA TCTTAAACAC CGCGATGAAA CTAGGGGTGT AGGTGGTCTA TTTTTCGATT ATCAAGATGG ACAAGGTGTT TTATATCGCG GCCCCAACCC TAAAGGCGAA GCAGCCAATT ACAGTAATCA AGTAGGAGAA CCAGCACCAC GGGACTGGGA AGATTTGTTT AGTTTTGTCC AAGGTTCTGG TAAGGCTTTT TTACCCGCCT ACGTCCCCAT TGTAGAGCGC CGTCATGGAA TAGAGTATGG CGATCGCCAA CGGAACTTCC AACTTTATCG TCGTGGTCGG TATGTCGAAT TTAACTTGGT TTATGACCGA GGCACAATTT TTGGCTTGCA AACCAACGGA CGTACTGAAT CTATTTTGAT GTCTTTACCA CCTTTGGTTC GTTGGGAATA CGGTTATCAA CCCGAACCCA ACTCTCCAGA AGCAGAGTTA TATGATACAT TCCTCAAGCC CCAAGATTGG AGCAACTGGA CAGCAAAACA GTAA
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Protein sequence | MVTNSQTPTV KAKISPSLPA TDAKARVSNF MKQLQDEITQ ALTKLDGVGQ FHEDSWERPE GGGGRSRVLR DGAIFEQAGV NFSEVWGSHL PPSILAQRPE AEGHGFYATG TSLVLHPRNP YVPTVHLNYR YFEAGPVWWF GGGADLTPYY PFAEDAAHFH QTLKGACDEH HPEYYPVFKR WCDEYFYLKH RDETRGVGGL FFDYQDGQGV LYRGPNPKGE AANYSNQVGE PAPRDWEDLF SFVQGSGKAF LPAYVPIVER RHGIEYGDRQ RNFQLYRRGR YVEFNLVYDR GTIFGLQTNG RTESILMSLP PLVRWEYGYQ PEPNSPEAEL YDTFLKPQDW SNWTAKQ
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