Gene Ava_4568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4568 
Symbol 
ID3680035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5722542 
End bp5723063 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content42% 
IMG OID637719923 
Producthypothetical protein 
Protein accessionYP_325060 
Protein GI75910764 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACA AAATTTTGGT TGCTGTCGAA AATACTGAAA TGGGTAAGCA AGTATTTGAG 
AGAGGTTTAT CATTAGCAAC AGCAACTAAC GCTGAATTAT TGTTGCTACA CGTTATCTCA
CCTTTCGATG AAGATTACTT GACTGCTGGA GAGATGGAAA CACAAAGTTC TTATGGAACC
TCTCAAGTTC ATAGTGTTGA GTATTACGTG GGAAAGTGGA ACGCTCTCAA GCAAGAGGGA
ATAGACTTTT TGACACTGTT CACTAATCAG GCGATCGCTC AAGGTGTAAC GGCTGATTTT
ACCCAAGAAC TAGGCGATCC TAGTCGCTTG ATTTGTGAAA TTGCCCGTAG TTGGAACGCC
GACCTCATTG TTTTAGGTCG TCGGGGTTTA CATGGCTTGA GTGAATTTTT CCTTGGTAGT
GTTAGCAATT ATGTTTTACA TCATGCTCCC TGTTCAGTCT TGACAGTGCA GGGAATCATT
TCCGCTACGC CAGAAACAAC AGAGACAGCA TCAACCATCT GA
 
Protein sequence
MFNKILVAVE NTEMGKQVFE RGLSLATATN AELLLLHVIS PFDEDYLTAG EMETQSSYGT 
SQVHSVEYYV GKWNALKQEG IDFLTLFTNQ AIAQGVTADF TQELGDPSRL ICEIARSWNA
DLIVLGRRGL HGLSEFFLGS VSNYVLHHAP CSVLTVQGII SATPETTETA STI