Gene Ava_4561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4561 
Symbol 
ID3680126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5716457 
End bp5716702 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content37% 
IMG OID637719917 
ProductHNH endonuclease 
Protein accessionYP_325054 
Protein GI75910758 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CTCCTCGGAT TCGTATACCA CCAGAAGTTA GACAATATGT ATTTCAAAGA 
GATAAATTTC AATGTCAAAG TTGTGGTAAA ACGGGTTTAG AAGCTGACTT AACTATTGAC
CATATTATTC CTTTGGCTCG TGGTGGTCAA AATGATATGA GTAACTTACA TACTTTATGT
TTTGACTGCA ACCGACGCAA GACTGATAAA CTGGATTCAC GCTTCCGGCG ACATTTTGAA
ATTTGA
 
Protein sequence
MSKTPRIRIP PEVRQYVFQR DKFQCQSCGK TGLEADLTID HIIPLARGGQ NDMSNLHTLC 
FDCNRRKTDK LDSRFRRHFE I