Gene Ava_4547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4547 
Symbol 
ID3680112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5701285 
End bp5701836 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID637719903 
Producthypothetical protein 
Protein accessionYP_325040 
Protein GI75910744 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAC TAAGCGAACG TCCAGGGACT GCCAGAATCA ACAACTTCCA AGAAAAGTTT 
ATCTACGAAG TTGGGGCGAT TTATGACGCG GAACATCGCT TTTGGGAGGC CCAGCAGACA
ATGTTGCAGT GTTGCCAAAA TAATCAACTC AGGTCTTTGA TTGAAACTCA CATCCGAGAA
ACAGAACAAC AAATTCGGAA TCTAGAACAG GTGTTCAACG CTTTGGGACA GCAACCAACG
CGGGTCACTT GTGATGCTGC GGCTGGTCTT GTCAGTGACG GTCAAAAGTT AATGCTCCTA
GCTTCAGAGA ATCAACCAAT TCTTAATTTG GGGTTGGCTG GTGGTCAAGC TAAGGTAGAA
CAGTTAGAAA TTGCCTGCTA CCGTGGTTTG ATTAGAGCTG CCGAACAGAT GGGACAAGAT
CAAGTTGTAC AATTGTTACG GCAAAACTTA CAGCAAGAGG AACAAACAGC TCAAAAAATA
GAACAACATC TGCCGCAGTT AATTCAAGAA GCCCAATCAG CAGGTGGTTC CAAGACTAGT
AAGTCTCGCT AG
 
Protein sequence
MVQLSERPGT ARINNFQEKF IYEVGAIYDA EHRFWEAQQT MLQCCQNNQL RSLIETHIRE 
TEQQIRNLEQ VFNALGQQPT RVTCDAAAGL VSDGQKLMLL ASENQPILNL GLAGGQAKVE
QLEIACYRGL IRAAEQMGQD QVVQLLRQNL QQEEQTAQKI EQHLPQLIQE AQSAGGSKTS
KSR