Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4537 |
Symbol | |
ID | 3680141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5687551 |
End bp | 5688753 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719893 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_325030 |
Protein GI | 75910734 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAATA TCGGTCAACT TTTAGTACAA GCGCAGGCGG CGCATAGTGC AGATGATTTG TCATTGGTGA TTAATGATCT GCAACAGTTG ATTTTAGTGG ATAGCAATGA AATAGGTCAC TCAGAACAAC TGCTGAAATT AGCCCTCTCT ATTTTTGAGA TGGGAGATTT TCAGCAACGT TGGGATATTG CCAAGGTGTT AGTTCATTTG GGAACTGCGA CCATCAACCC ATTAATTGAC ATCCTAGAAG ATGAAGATAC AGAGGATGAA TTGCGCTGGT TTGCTGCCCG AATTTTAGGT GAATTACAGC ACCCAGATGC GATTATGCCT CTGGTAGAAC TATTGAAAAC TAGTGAGGAG GATGAACTGA AAGCGATCGC CTCATCCGCA ATAGCGCAAA TGGGTAGTAT GGCTATTCCT GTGCTTGTAG AACTGCTAAC ACAAGAAAAT ACAAGACTTT TGGCAGTGCG ATCGCTTGCT TATATTCGGC GTACAGAAAC TATTGCGCCT TTATTGAGTG TGGTGCAAGA TACTCAAGCC TCCGTCCGCG CTGCCGCACT CGAAGCCCTC AGCAGTTTTC ATGATGAACG TGTACCACCC ATACTGTTGA ACGCTTTAAA TGATTTATCT GCCGCAGTCA GACGTACAGC GATTCAGGGT TTAAGTTTTC GCTCTGATTT ATCTTCAGAA TTAAATTTAG TCGCCACATT ACAACCCAAA TTGTACGACT TTAGTGTGGA GGTGTGTTGT GCAGCTGCCA ATGCTCTTGC CCGGATGGGT GGTGATGACG CAGCCAAGCA CCTATTCACA GGTTTGATAT CACCTCACAC ACCTATTACC TTACAACTGG AAATTATTCG CGCTTTGAAT TGGCTAGAGT CACTAAAGGC GCTGGAGTAT TTACGACAAG CTTTAAATCA AGTCACTTCC ATAACTCTTT GCCAAGAAGT TGTCACAGTT CTAGGAAGAA CACAAAAGCC TGAGTTAAAA ATACCAGCCA CAGCCATTCT GTTAGAGATA CTGAACTCGC CACATCCAGC TATAAAAACT AATAGTGTGA AAAGTGCGAT CGCTTTATCT TTGGGTCAGC TAGGTAGTCC AGAAGCAACG GAAAGCTTAA CCATGCTGTC ACAAGATACA GATGAACTTG TCCGAGTCCA TGCGATCGCT GCACTCAATA AGCTAGCCCC TGCTGCTGTA TAA
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Protein sequence | MNNIGQLLVQ AQAAHSADDL SLVINDLQQL ILVDSNEIGH SEQLLKLALS IFEMGDFQQR WDIAKVLVHL GTATINPLID ILEDEDTEDE LRWFAARILG ELQHPDAIMP LVELLKTSEE DELKAIASSA IAQMGSMAIP VLVELLTQEN TRLLAVRSLA YIRRTETIAP LLSVVQDTQA SVRAAALEAL SSFHDERVPP ILLNALNDLS AAVRRTAIQG LSFRSDLSSE LNLVATLQPK LYDFSVEVCC AAANALARMG GDDAAKHLFT GLISPHTPIT LQLEIIRALN WLESLKALEY LRQALNQVTS ITLCQEVVTV LGRTQKPELK IPATAILLEI LNSPHPAIKT NSVKSAIALS LGQLGSPEAT ESLTMLSQDT DELVRVHAIA ALNKLAPAAV
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