Gene Ava_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4529 
Symbol 
ID3680133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5677378 
End bp5678037 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content41% 
IMG OID637719885 
Producthypothetical protein 
Protein accessionYP_325022 
Protein GI75910726 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.75099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTAT GCCACAGTAA AGATGTATCA GAGTTTTGCC TTGAAGGCAG ATTTATTGAA 
TTTGTTATTA AAGATGGCTA TAAGCTTAAA GGTTTATTAC TGCTAACTGC TGACGGTGAA
TGTTACGTTA AGTTATCCAA GCAATTAAGA TTTACTTTTG ACTGGCGTTT ACCTACTGGT
ACTTTGTTAC AAGTAGTTGG TGAAAAAAAG TATGATGCTA AAACTGGCAA AGTTACTCTC
AAAGCTGAAG CTGTAATGGC GGCTAGAACA GAGACATCAC CAGCCGTTAA GCAACTCCCA
GCAATGGAAA ACACAAAGCC AAAACCAGAT AAAGCTAAAG CTACGATTTT GGTATGTCAG
AAGTCCGACT GCATGAAACG GGGCGGGAAG GCACTTTGTC AAGCATTAGA AGCAACTTTA
AGCGATCGCG GTTTAGAAGA CCAAGTAACC ATTAAAGGTA CTGGCTGCAT GAAAAACTGC
AAAGCTGGGC CTAACTTAGT GATGCCAGAT AAAACTCGCT ACACCCGTAT TCAAGCAGAC
CAGGTTCCTC AGCTGATGAA TAAGCATTTT GCTGACAGCC AGCAATCAAG TCATTCCCAT
CAGGTGGTAA TATCAAACAC CAATAACTTT GAACCTTTTA CCAAAGTTTC CGCTTTTTAA
 
Protein sequence
MGVCHSKDVS EFCLEGRFIE FVIKDGYKLK GLLLLTADGE CYVKLSKQLR FTFDWRLPTG 
TLLQVVGEKK YDAKTGKVTL KAEAVMAART ETSPAVKQLP AMENTKPKPD KAKATILVCQ
KSDCMKRGGK ALCQALEATL SDRGLEDQVT IKGTGCMKNC KAGPNLVMPD KTRYTRIQAD
QVPQLMNKHF ADSQQSSHSH QVVISNTNNF EPFTKVSAF