Gene Ava_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4524 
Symbol 
ID3680128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5670907 
End bp5672421 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content35% 
IMG OID637719880 
Producthypothetical protein 
Protein accessionYP_325017 
Protein GI75910721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATT TGGAAATACT TATTAATAAT TTGCCAAAAA TTGTTTATGG TCTAAGACTT 
ACTTTAGGTA ATTCTCAGGA GATCATACAA CAAGTTGTCC TGATTAATCA GGCTCAGGAG
CAACTGCACA ATATTCAACA GGCGATTAGC TATGCACTGG CGGAGGCAAT TACTCAACCA
TTAAGTCTTG CTACCCATAA AGGTACTGCT ACCCCGCCTC AGCTGAGTGC TGCAAGATGT
TTGTTATTAC CTAGTATTTT GCGGGTAGAA CCAACTATCA CTGGTAACAC AAGACTAATT
ACTGAAAAAT TTGGCAATCC CGCCATAGAA ATATCTTTAG ATACTTTAAA ATCGAAAATA
AATTACTGGT TAGAGTGGGG GAATTTATTA CAAGCGATCG CCGCAGATAT TTTAAGCGAT
TCTCATCTGG TCAATAAAGT CAATGCAGAT ATTAGTCATC CCAGCTTAAG CACTCATATT
GAACATTTAA GCAAGAGTAT AGATATCAAG TTAGCTTTTA GTAATCCTAA AATTCTAGAA
AAGCAAATTC AGCAAATTAT TAACATTGAA GAGGAAGTAT TAAAAGCTCA AGACAGACTA
TTTTATGTTG TCAACACTAT TAAAAATAGT CAGGGATTAT TAACAATTCT ACTGGCAATA
TCATCATTTT GTGGTCAATC AGGCTTTGCT ATAGAATGGT TAGATGATAC GCACGAATTA
ATTATATCTA GTGAAAATAA GTTTCAAGAA TTGACTGATA TTCTCGATGA TTGCGAAAAA
TTCCAGGATA GACTCACTGC TTTCTTAACC GAATGCCAAC AATTAAAAGA GCAGGCACAG
AAAAGTTTAA CTAATAACAA GTATATAAAT CGCCGTACAG AAAAACTAGC TAATAATTTC
TCACCAATAT TACATACAAC TCTATTTATC ACATCAAGTT TAGTTATTTT AATCTTTGGT
ATTGGAATTA TCAAAGATAA AATCAATCAA CCTCAACACA CTACCCAAAA TGTTGATCCA
GAAACACAAG CTGCCAGTAA CTTCAAATCT GCTTTAAAAC TGGGAATGGA AGCTTCTTCC
ATAGCTCAAA ATCCGCCCCA TCCTGTGACA GTTTGGCAAA AAGCCGCAAG TAAGTGGCAG
CAGGCAATAA AATTTTTAAA CTTGATTCCC GAAGGAACAT CTGTTTCTAT AAAGGCACAC
GATAGACTGA TTCGTTACAG ACGTAATTAT GATGCGATTA ATAAAAGAGC AGCATCTGAA
CAACAAGCGT TAATGAACTT AGAAGCAGCC GAAAAGTTAG CTACAGAAGC TGCGTTTTTT
ATAAAAAATT CGCCAAATTC ATTATTAGCT TGGCAGCAAT CAAAAGATAA ATGGCTACAG
GCTATTACAT TATTGGAAGC TATCCCTCGA AATAGCTTTA CTTATCAACA GGCTCAAGCT
ACACTTCCCA ACTATAAAAC ACACTATGCA GCAATTAATG CCATCATTCA AAACAGATTA
CAGTCTGTAA ATTAG
 
Protein sequence
MTDLEILINN LPKIVYGLRL TLGNSQEIIQ QVVLINQAQE QLHNIQQAIS YALAEAITQP 
LSLATHKGTA TPPQLSAARC LLLPSILRVE PTITGNTRLI TEKFGNPAIE ISLDTLKSKI
NYWLEWGNLL QAIAADILSD SHLVNKVNAD ISHPSLSTHI EHLSKSIDIK LAFSNPKILE
KQIQQIINIE EEVLKAQDRL FYVVNTIKNS QGLLTILLAI SSFCGQSGFA IEWLDDTHEL
IISSENKFQE LTDILDDCEK FQDRLTAFLT ECQQLKEQAQ KSLTNNKYIN RRTEKLANNF
SPILHTTLFI TSSLVILIFG IGIIKDKINQ PQHTTQNVDP ETQAASNFKS ALKLGMEASS
IAQNPPHPVT VWQKAASKWQ QAIKFLNLIP EGTSVSIKAH DRLIRYRRNY DAINKRAASE
QQALMNLEAA EKLATEAAFF IKNSPNSLLA WQQSKDKWLQ AITLLEAIPR NSFTYQQAQA
TLPNYKTHYA AINAIIQNRL QSVN