Gene Ava_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4520 
Symbol 
ID3680182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5665686 
End bp5666108 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content38% 
IMG OID637719876 
Producttransposase IS200 
Protein accessionYP_325013 
Protein GI75910717 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGAG ATAGTTTGAG AAAAGGAGCG CACGTAGTTT TTGATATTCA TTTACACATG 
GTTTTTATAA CCAAGTTTCG TAGGTTAGTT TTTACAGAGG CGATGCTTGC AGATATGGAG
CCTATTTTTG TGCGGGTATT GACGGCTCAT CAGTGCATCC TTGAGGAATT CAATGGAGAA
CCGGATCATG TACATTTGCT TATCAATCTA CACCCAGACA ACAATATTTC TGATTTAATG
GCTTCACTTA AATCTGCTTC TAGCAGAATT TTGAGACAAC AATACAAATC AGAAATAGGT
AAGTTTTACT GGTCGGAAAA AGTTAAACTA TGGCATGATT CTAAATGTGT AGTTTCTTGT
GGTGGAGCGC CACTGGAAAT AGTCAAAGAT TATATTAAAG GGCAGTCGGG TGGAAAAGAA
TGA
 
Protein sequence
MSRDSLRKGA HVVFDIHLHM VFITKFRRLV FTEAMLADME PIFVRVLTAH QCILEEFNGE 
PDHVHLLINL HPDNNISDLM ASLKSASSRI LRQQYKSEIG KFYWSEKVKL WHDSKCVVSC
GGAPLEIVKD YIKGQSGGKE