Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4520 |
Symbol | |
ID | 3680182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5665686 |
End bp | 5666108 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637719876 |
Product | transposase IS200 |
Protein accession | YP_325013 |
Protein GI | 75910717 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTAGAG ATAGTTTGAG AAAAGGAGCG CACGTAGTTT TTGATATTCA TTTACACATG GTTTTTATAA CCAAGTTTCG TAGGTTAGTT TTTACAGAGG CGATGCTTGC AGATATGGAG CCTATTTTTG TGCGGGTATT GACGGCTCAT CAGTGCATCC TTGAGGAATT CAATGGAGAA CCGGATCATG TACATTTGCT TATCAATCTA CACCCAGACA ACAATATTTC TGATTTAATG GCTTCACTTA AATCTGCTTC TAGCAGAATT TTGAGACAAC AATACAAATC AGAAATAGGT AAGTTTTACT GGTCGGAAAA AGTTAAACTA TGGCATGATT CTAAATGTGT AGTTTCTTGT GGTGGAGCGC CACTGGAAAT AGTCAAAGAT TATATTAAAG GGCAGTCGGG TGGAAAAGAA TGA
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Protein sequence | MSRDSLRKGA HVVFDIHLHM VFITKFRRLV FTEAMLADME PIFVRVLTAH QCILEEFNGE PDHVHLLINL HPDNNISDLM ASLKSASSRI LRQQYKSEIG KFYWSEKVKL WHDSKCVVSC GGAPLEIVKD YIKGQSGGKE
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