Gene Ava_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4517 
Symbolera 
ID3680179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5663583 
End bp5664596 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content44% 
IMG OID637719873 
ProductGTP-binding protein Era 
Protein accessionYP_325010 
Protein GI75910714 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTAAAG AAAAAACTAA GTTATCCCAG CTAGAAAATA TGACGGCGGA ACTAAAAGTG 
GCTAGTATTG ATAATCACAT CTCCTCCTTG TCAGGCGAAG TATCAATTCC CCAAGCTCCA
CCTGAATTTA AATCAGGGTT TATCGGCATT ATCGGCCGTC CTAATGTCGG CAAATCTACC
TTGATGAATC AATTAGTAGG ACAAAAAATT GCCATCACTT CACCAGTAGC CCAGACAACA
CGCAATCGTT TGAGAGGAAT TGTTACTACA CCAGAGGCGC AGTTAATCTT TGTTGATACG
CCAGGAATTC ACAAACCCCA TCATCAATTA GGTGAAGTAC TGGTAAAAAA TGCCAAACTC
GCTATCGAAT CAGTGGATGT AGTATTGTTT GTTGTCGATG GTACAGTGGC TTGTGGTGCA
GGCGATCGCT TTATTGCCGA TTTACTAATT CATAGCAAAA CCCCAGTTAT CTTGGGTATC
AATAAGGTAG ATCAACAACC CTCCGACTCC CAAAATATAG ATGATAGCTA CCAGCAGTTA
GCAAGTGCAT ATCAATGGCC GACGGTAAAA TTCTCGGCTA AGACTGGTGC AGAGTTGCCC
CAACTACAAG AATTATTAGT AGAGCATTTA GAGCATGGGC CGTACTATTA TCCCCCAGAC
TTGGTAACAG ACCAGCCAGA ACGGTTCATT ATGGGGGAGT TAATCAGAGA ACAGATTTTG
TTGTTGACTC GTGAAGAAGT ACCTCATTCA GTAGCGATCG CCATTGACTT AGTTGAAGAA
ACACCAACTA TTACCCGTGT TCTCGCAACA ATCCACGTTG AGCGGGACTC CCAAAAAGGC
ATTCTCATCG GGAAAGGTGG CTCAATGCTC AAATCTATCG GTAGCGCAGC CCGTGAACAA
ATTCAAAAGC TCATTGCTGG TAAAGTCTAC CTAGAGCTAT TTGTCAAAGT CCAACCCAAA
TGGCGACACT CCCGTGTCAG ACTAGCAGAG TTAGGCTATC GCGTGGAAGA ATGA
 
Protein sequence
MSKEKTKLSQ LENMTAELKV ASIDNHISSL SGEVSIPQAP PEFKSGFIGI IGRPNVGKST 
LMNQLVGQKI AITSPVAQTT RNRLRGIVTT PEAQLIFVDT PGIHKPHHQL GEVLVKNAKL
AIESVDVVLF VVDGTVACGA GDRFIADLLI HSKTPVILGI NKVDQQPSDS QNIDDSYQQL
ASAYQWPTVK FSAKTGAELP QLQELLVEHL EHGPYYYPPD LVTDQPERFI MGELIREQIL
LLTREEVPHS VAIAIDLVEE TPTITRVLAT IHVERDSQKG ILIGKGGSML KSIGSAAREQ
IQKLIAGKVY LELFVKVQPK WRHSRVRLAE LGYRVEE