Gene Ava_4511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4511 
Symbol 
ID3680173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5655978 
End bp5656796 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID637719867 
Producthemolysin A 
Protein accessionYP_325004 
Protein GI75910708 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAAAC AGCGACTAGA TAATTTATTA GTAGAGTTAA ACTTATGTAA TTCTCGCACT 
TTAGCACAGA GGCTAATTCA GGCGGGGGAA GTGACTGTTA ATGAACAGGT AATTGATAAG
CCGGGGACAG AGGTTGATGT TGCGGCTCAG ATTAAAATTA AAGAGCGATC GCGCTTTGTT
TCCCGTGGTG GTGAGAAACT GGCTAAGGGT TTGGAATTAT TCGCCATCTC TGTAAATGGG
CGTGTTTGCT TGGATGGGGG CATATCTACG GGTGGTTTTA CTGATTGTTT ACTCCAAGCT
GGGGCAAAGC TAGTTTACGG TATCGATGTG GGTTACGGGC AAACCGATTG GGGTTTACGA
AACAATCCTC AGGTGATTTT GCGCGAACGT ACTAATTTAC GTCAATTGCA ACCTGAAGAT
TTATATGGTG ATGGGGATGC TATCCCCGAT TTGGCAGTGG TGGATGTTTC TTTTATTTCC
TTAACTAAGA TTTTGCCAGC CTTATGGCAA TTAACTCAAC CCCCACGAGA AGCCGTGCTA
TTGGTTAAGC CACAGTTTGA GGTGGGAAAA TCTCGTGTGG GTAAAAAAGG CGTTGTTCGC
GATCCCCACG ACCAAGCTGA CGCTATTTTT CAGGTGTGGC AAGCGGCTGA TAAATTAGGC
TGGAAGTATA AGGGCTTAAC TTGGTCACCG ATTACTGGCC CGGCGGGAAA TATCGAATAT
CTCCTATGGT TGAACATGGA AAGCGAAACG CCACCACCAG ATTTAAATGC GATTCAACAA
GTTACTCAAT TGGCTATGAC TGATATCAAG TCGGGTTAA
 
Protein sequence
MAKQRLDNLL VELNLCNSRT LAQRLIQAGE VTVNEQVIDK PGTEVDVAAQ IKIKERSRFV 
SRGGEKLAKG LELFAISVNG RVCLDGGIST GGFTDCLLQA GAKLVYGIDV GYGQTDWGLR
NNPQVILRER TNLRQLQPED LYGDGDAIPD LAVVDVSFIS LTKILPALWQ LTQPPREAVL
LVKPQFEVGK SRVGKKGVVR DPHDQADAIF QVWQAADKLG WKYKGLTWSP ITGPAGNIEY
LLWLNMESET PPPDLNAIQQ VTQLAMTDIK SG