Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4511 |
Symbol | |
ID | 3680173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5655978 |
End bp | 5656796 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719867 |
Product | hemolysin A |
Protein accession | YP_325004 |
Protein GI | 75910708 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAAAC AGCGACTAGA TAATTTATTA GTAGAGTTAA ACTTATGTAA TTCTCGCACT TTAGCACAGA GGCTAATTCA GGCGGGGGAA GTGACTGTTA ATGAACAGGT AATTGATAAG CCGGGGACAG AGGTTGATGT TGCGGCTCAG ATTAAAATTA AAGAGCGATC GCGCTTTGTT TCCCGTGGTG GTGAGAAACT GGCTAAGGGT TTGGAATTAT TCGCCATCTC TGTAAATGGG CGTGTTTGCT TGGATGGGGG CATATCTACG GGTGGTTTTA CTGATTGTTT ACTCCAAGCT GGGGCAAAGC TAGTTTACGG TATCGATGTG GGTTACGGGC AAACCGATTG GGGTTTACGA AACAATCCTC AGGTGATTTT GCGCGAACGT ACTAATTTAC GTCAATTGCA ACCTGAAGAT TTATATGGTG ATGGGGATGC TATCCCCGAT TTGGCAGTGG TGGATGTTTC TTTTATTTCC TTAACTAAGA TTTTGCCAGC CTTATGGCAA TTAACTCAAC CCCCACGAGA AGCCGTGCTA TTGGTTAAGC CACAGTTTGA GGTGGGAAAA TCTCGTGTGG GTAAAAAAGG CGTTGTTCGC GATCCCCACG ACCAAGCTGA CGCTATTTTT CAGGTGTGGC AAGCGGCTGA TAAATTAGGC TGGAAGTATA AGGGCTTAAC TTGGTCACCG ATTACTGGCC CGGCGGGAAA TATCGAATAT CTCCTATGGT TGAACATGGA AAGCGAAACG CCACCACCAG ATTTAAATGC GATTCAACAA GTTACTCAAT TGGCTATGAC TGATATCAAG TCGGGTTAA
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Protein sequence | MAKQRLDNLL VELNLCNSRT LAQRLIQAGE VTVNEQVIDK PGTEVDVAAQ IKIKERSRFV SRGGEKLAKG LELFAISVNG RVCLDGGIST GGFTDCLLQA GAKLVYGIDV GYGQTDWGLR NNPQVILRER TNLRQLQPED LYGDGDAIPD LAVVDVSFIS LTKILPALWQ LTQPPREAVL LVKPQFEVGK SRVGKKGVVR DPHDQADAIF QVWQAADKLG WKYKGLTWSP ITGPAGNIEY LLWLNMESET PPPDLNAIQQ VTQLAMTDIK SG
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