Gene Ava_4508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4508 
Symbol 
ID3680170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5652695 
End bp5653771 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content38% 
IMG OID637719864 
Producthypothetical protein 
Protein accessionYP_325001 
Protein GI75910705 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA ATACACCTAA ATTTTCACAA GGTAGTACAT CTGATACTGT AGGTTACGAA 
GATTTTTTAG TTGATTTAAA GACGCGAATT TCCAACGCAC AATTAAGGGC GGTAGTTGCA
GTCAATAAAG AGTTAGTCTT GCTGTACTGG CAAATTGGGC GAGATATTCT CCATCGGCAA
CAGCAGCAAG GGTGGGGTGC AAAAGTAATT GATCGACTGG CCTCTGACTT GCGAAAGGCT
TTTCCGGACA TCAAAGGCTT TTCATCTAGA AACCTCAAGT ATATGCGGGC ATTTGCTGAA
GCTTATAATG ATGAAGAGTT TGTGCAACAA GCTGTTGCAC AAATTCCTTG GGGTCATAAT
GTCCGTCTTT TAGATGCTGT TAAAGATCCA GCAGAGCGTT TATGGTATGC ACAGCAAACC
ATTCAAAATG GTTGGAGTCG CAATGTTTTA GTTCACCAGA TTGAAAGCAA GTTATATCAA
CGCCAAGGTA AAGCAACCAC AAACTTTAAC AACACCTTAC CTCAACCACA ATCAGAATTA
GCACAGCAGT TATTAAAAGA CCCCTATACA TTTGATTTTC TCAACTTAGG CGAAGATTTT
TTAGAAAGGG ATTTAGAGCG TGCTTTAATC AAGCACATCC GTGATTTTTT GCTGGAGTTA
GGAGTTGGTT TCGCTTTTGT TGGTAGCCAG TATCATCTAG AGGTTGGTGG CGAAGATTTT
TATATAGATT TATTGTTTTA TCACCTGCGT TTACGCTGCT TTGTGGTGAT TGATTTGAAG
ATTGAAGATT TTAAACCAGA GTTTTCTGGC AAAATGAATT TCTATGTGAG TGCCGTAGAT
GATTTATTGA GACACCCTAA TGATCAGTCT ACGATTGGAA TCATTTTGTG TAGAAGTAAA
AATAAAGTGA TCGCCGAATA TTCACTACGA GATATGTATA AACCTATTGG TGTTTCTACA
TATCAATTAA AAGATAACTT GCCGGAGTTT GTGCAAGATA ATTTACCAAC TATCGAGCAG
TTAGAATCTG AGTTGGAAAC CGTAGTATTA AAATTAGAAA AACTAGATGA TTTATAA
 
Protein sequence
MADNTPKFSQ GSTSDTVGYE DFLVDLKTRI SNAQLRAVVA VNKELVLLYW QIGRDILHRQ 
QQQGWGAKVI DRLASDLRKA FPDIKGFSSR NLKYMRAFAE AYNDEEFVQQ AVAQIPWGHN
VRLLDAVKDP AERLWYAQQT IQNGWSRNVL VHQIESKLYQ RQGKATTNFN NTLPQPQSEL
AQQLLKDPYT FDFLNLGEDF LERDLERALI KHIRDFLLEL GVGFAFVGSQ YHLEVGGEDF
YIDLLFYHLR LRCFVVIDLK IEDFKPEFSG KMNFYVSAVD DLLRHPNDQS TIGIILCRSK
NKVIAEYSLR DMYKPIGVST YQLKDNLPEF VQDNLPTIEQ LESELETVVL KLEKLDDL