Gene Ava_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4505 
Symbol 
ID3680167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5649758 
End bp5650612 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content44% 
IMG OID637719861 
Producthypothetical protein 
Protein accessionYP_324998 
Protein GI75910702 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.15421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.57305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTTT CTATTGGTTG CGCTGTTTGG GCTTATAAAG GTTGGGTAGG CGAACTTTAT 
CCCCCAGGAA CTCGTGCTGG GGAATTTCTT CACCTCTACA GTCGTCGCTT CACTACCGTA
GAAGGTAATA CTACTTTCTA TGCAACACCA AATCAAGAAA CTGTCAGCCG TTGGGCAAAA
GAAACACCAC CAGGCTTTGA GTTTTGTTTG AAATTACCAC GGGATATTAC CCATCAAGGT
TTATTAAAAC CCTATATTCC CGCCGCTTTA ACATTTTTGG CAGGGATGCG CCCTTTGGGT
AAGCGTCTTG GCCCTATATT TGCCCAGTTA CCACCAAGTT ACGCACCAAC ATTAATTGAA
GATTTGGCTG CTTTTCTGGA AGCTTGGCCG CGCACAACAG CACCCCTAGC CCTAGAAGTA
AGACATCCTG ACTGGTTTCG AGAACCCCAT ACAAGTAATT TGACACAGCT TTTAGAAAGT
CTGGGCGTGG GAAGAGTACT ACTGGATTCA CGGCCTATCT ACACGGGAGA TGATGACCCC
CAGTTACAAT CAGAACGACG TAAACCAAAA TTACCATTAC AATTTAGCGT AACTGCACCT
TTTAGCTTGA TTAGGTTTAT TTCCCATCCT AATTTGGCAG TGAATCAACC ATTTATGGAA
GAGTGGGTAC AACAGATTCA ACAATGGTTA CAAGCAGGGA CAAAAATCTA TTTCTTTGTT
CATTGTCCTA TAGAGGAGCG ATCGCCTAAC ACTGCCCGTC ACTTCCAAAA ACTCTTAGAA
CAGAACGGTG TACCAGTCCC ACCGCTACCG TGGAATCATC TGCAATATCC ACCTAATCAA
CTGAATCTCT GGTAA
 
Protein sequence
MNFSIGCAVW AYKGWVGELY PPGTRAGEFL HLYSRRFTTV EGNTTFYATP NQETVSRWAK 
ETPPGFEFCL KLPRDITHQG LLKPYIPAAL TFLAGMRPLG KRLGPIFAQL PPSYAPTLIE
DLAAFLEAWP RTTAPLALEV RHPDWFREPH TSNLTQLLES LGVGRVLLDS RPIYTGDDDP
QLQSERRKPK LPLQFSVTAP FSLIRFISHP NLAVNQPFME EWVQQIQQWL QAGTKIYFFV
HCPIEERSPN TARHFQKLLE QNGVPVPPLP WNHLQYPPNQ LNLW