| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4504 |
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| Symbol | |
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| ID | 3680205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5644071 |
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| End bp | 5649458 |
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| Gene Length | 5388 bp |
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| Protein Length | 1795 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719860 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_324997 |
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| Protein GI | 75910701 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.575028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA CCGTAGATAC AACTGTTTTA CTGTCTGGAT ATCAGTTGAT TGAGCAGCTT
TATCACGGCT CTAAAACCCT TGTTTATCGT GGAATACGGC GAAAGGAAAG TGTAGCGCAA
CCTGTGGTGA TTAAGCTGTT GCAACGCGAT TATCCTAGCT TTAGTGAACT ATTACAATTT
CGCAATCAAT ACACCATCAC CAAAAATTTA AATATTCCTG GTGTTGTCCG CCCTAGTTCT
CTAGAACCCT ATGGCAACAG CTACGCTTTG GTCATGGAAG ATTTTGGTGG GGTATCATTG
GGAACATATA GTCAAACCCA CTCTTTGTCT TTGGTGGATG TATTAGCGAT CGCCATTCAA
CTGGCAAATA TTCTACATGA TCTCTATCAA AATCGTGTCA TCCACAAAGA TATCAAACCC
GCTAATCTGC TAATTCATCC TGATACTAAA AAAATTCAGC TCATCGATTT TAGTATTGCT
TCACTACTAC CCAAGGAAAC CGAAGCCGTT AAACACCCGA AGGTTTTAGA AGGGACACTC
CCCTATCTCG CACCAGAACA AACTGGAAGG ATGAACCGGG GGATAGATTA TCGTAGCGAT
TTTTATGCTT TCGGTGTGAC ATTATTTGAG ATGTTAACAG GACAGTTACC TTTTATATCA
GATGATCCTT TGGAATTAGT GCATTGTCAC ATTGCCAAAC CTGCGCCCTC GGTGTGTGCA
TTACGACCAG AAATTCCCTC AGTAATTGGA GAAATCATAG GGAAATTAAT GGCGAAGAAC
GCCGAGGATC GTTATCAAAG TGCATTGGGC TTGCAGTATG ATTTACAAAA TTGTTTGGAA
CAACTGCAAA ATACAGGTAA AATTGAGGCA TTTGAGATTG CTACACGGGA TATTTGCGAT
CGCTTCCTGA TTCCTGAAAA ACTTTATGGT CGGGAGGAGG AAGTCGCTAC ACTACTCACA
GCCTTTGAGC GTGTCAGCAA TGGTAATTCT GAACTGATGT TAGTAGCTGG TTTCTCTGGG
ATTGGCAAAA CAGCCGTTGT CAATGAAGTT CATAAGCCCA TTGTTGAGAA GCGGGGCTAT
TTTATTAAAG GTAAATTTGA TCAATTTAAT CGCAGTACGC CCTTCTCGGC GTTTGTGCAA
GCATTTCGTG ATTTAATAGG GCAATTGTTG AGTGAGAGTG ATGAGCAATT GCAGACTTGG
AAAACCCAGC TTTTACAGGC TTTAGGTGAA AATGGACAAG TCATTATTGA AGTCATTCCC
GAATTAGAAC GCATTATTGG CGAGCAACCC CCTGCTAGAG AATTATCTGG GAATGCAGCA
CAAAATCGCT TTAAATTACT ATTTCAGAAC TTTATCCACG TTTTTACTAA ACCGGAGCAT
CCCTTAGTTA TCTTTTTAGA TGATTTACAA TGGGCAGATT CCGCTTCCCT CAACTTAATG
CAAGGATTAA TAGCGGAGTC AAAAATAGGT TATTTGCTGC TGCTTGGGGC ATATCGTGAC
CATGAAGTTT ACCCTGCTCA TCCTTTGATG TTGACTCTGG AGGCAATCGA GAAAACAGGA
GCAACAATCA ATACAATTAC TCTACAACCA TTGAGTTTAA CTAGTCTCAA TCAATTGATT
ACGGATACCC TAAATTGTAC AGCAACCTTA GCGCAACCAT TAACTAAATT AGTCAACCAA
AAAACCCAGG GTAATCCCTT TTTTGCTACC CAATTTCTCA AGGCATTATA TCAAGATGAA
CTGATTTATT TTGATTTAGT AACCGGATAT TGGCAATGTG ATCTTGTTCA AGTGAAGGCA
GCAGCGTTAA CTGATGATGT GGTGGAATTT ATGGCATTGC AGTTACAAAA ACTGCCACCA
GTCACCCAAG ATATTTTAAA GTTAGCTGCT TGTATCGGCA ATCAATTTGA TTTAAATACC
CTGGCGATCG TCTCGGAAAT ATCTCCAGCA GAAACATCTA CAATCTTGTG GAAGGCATTA
CAAGAAGAGT TAATTCTCCC CCTGAGTGAA ACATATAAAT TCTTCCAGTC TAGCCCACAT
CAAACAACAG GCGATTGCCA AATTACCATC AGCTATAAAT TTTTCCATGA CCGTGTACAA
CAAGCTGCTT ATTCTCTAAT TCCCCAAGAG CAGAAAACAG CTACTCACTT GAGAATCGGT
CAACTCCTTT TAACTCATAC CCCAGAAACA GAATTAGAAA ATCGCATTTT TGATATTGTT
AATCAGTTAA ATGTCGGTGT TGCTTATTTA ACGGATCAGC CTGAAAAACA GCGATTACTG
GAATTAAATT TAATGGCTGG GCGTAAAGCG AAAGTTGCTA CTGCTTATGT TGTCGCTGTC
GATTATTTAA ATACAGCCAT CAAACTCCTT GAAGAAGATA GTTGGCAAAA TCAATATGAA
CTTACTCTGA GTTTATATGA TTTGGTAGCG GAGACTGAAT ATTTAAATAC GAATTTTCCC
ACTTCCGAAT TACTAGTGAG AGAAATACTG GTAAATGCCA AACATACCTT AGATAAAATC
AAAGCTTACG AAATTCAAAT TCAAGCTTAT ACAGCGCAAA ATAAACTCAT AGAAGCGATC
AATATAGGTA GAGAAGTTTT AGGTTTACTT GGTATTGATT TGCCCGAAGA TGGCAACATA
GAAACCATCA TAACTGAACA TGGTCGATTG AAGTCACTGT TTGGGGAACG GCTGATTGAA
GATTTAGTAA ATTTACCCGA ACTGACAGAT TTACAACAAG GTGCAGCTTT AAGAATCTTA
TGTGGTTTAT TTGCTCCGAT TTATCTTGCC AAACCAATGC TGTTACCTTT AAAGATATTC
ACAATGGTGA AAATCTGTAT TCAATATGGT AACTCTCCGC AATCTGCGAT CGCTTACAGT
TTGTATGGAT TATTTTTGTG TGCATCGGAG GAAATTGCTG ATGGCTATCA ATTCGGTCAA
TTAGCCATGA CAGTGTTGGA TAAATTTAAT GCCCAAGAGC TAAGAAGTAA AGTTTATCTA
ACTTTTGCAC TGTTTATTAA ACATTGGCAA GATAGTATTA ACTCCACTTT AAATATATTT
TTAGAAGGTC TCAAAAGTGG TCTAGATACT GGTGATTTAG AATATGTTGG TTATTGTGCC
AATTGTTATG CTCAGTTTTT ATTCTGGACA GGACAAAATC TAGAAATTGC CGAAGCAGAG
GCTAATAAGT ATTGTGCTTT GATGCAGGAT CTTAAACAAG ATGTCTCGTT AATTTGGGGA
AATACATGGC GACAAACTGT CATGAATTTA CAAGCTAAAG TTGATAATCC ACAAATGTTA
GTGGGTGAAT GTTTTGATGA AACCGTCACT CTCCCTGCTT TAATTTCTAG CCGTAATACC
AATGGTATTT GTTACGTTTA TCTGGCTAAA TTATTCTTGG CTTATTTGTT GGGAGCAGAT
GAGCAAGCTA TTAAATACGC CAGTCTATTT GAAGAGTACG AACAGGGTGC GGCTGGTTTA
TTAATTGTGC CGTTGAAGAA TTTTTACCAA TCCCTGAGTA TACTTTCGTT GTATCCCAAG
TTGGATACCG AGCAACAATC TCGCCATTTA GAAAAGATTA CAAATAATCA ACAAAAAATG
CAAAATTGGG CAGATCATGC GCCCCTAAAT TATCAACATA AGTTCTATTT AGTCGCAGCC
GAAAAACATC GCGTTTTAGA CGAGAAAACA GCTGCGATAG AATTATATGA CCAAGCGATC
GCCCTAGCCA AAACCAACGG TTACATCCAA GAAGCCGCCC TAGCTAACGA ACTAGCGGCT
AAATTCTACC TGGACTGGGG TAAAGAAAAA GTCGCCGCCG CCTATATGCA GGAGGCTTAT
TACTGCTATG CCCATTGGGG TAGCCTCGCC AAAACCAATG ATCTAGAAAG CCGCTATCCC
CAACTGTTAC GTCCAATACT GCAACAAGTC ATTCACCCCT TGAGCATTTT AGAAACCTTC
GCCAGCCTCA CTAGTTCCGT GCATTCTACC CGTCACCAAA GTTCTTCCAG CACCAGCATT
AACCATATGC TGGATTTTGC CGCACTACTG CAAGTATCCC AGGCAATTTC TAGCACGATT
CAACTAGATA AGTTACTACA AACCATGACT GAGACAGTGC TGGAAAATTC CGGGGCTGAT
TATTGTGCTT TAATACTGTG TCAAGAGGGC GAATGGCAAG TCAAAGTAAT AGCTAACTCT
CAGCAAACCT CCTTACAATC CACTCCCCTG GAAAACAATC CTACTGTTCC TGTCAAGCTC
ATTCAGTATG TCAAAAATAC CTTAGAAACA GTTGTCATCC ATGATCTAAA AACCGAGATA
CCAGGTGTGA TGAGCAATTA TCTTGATCAG CATCACCCCA AAAGCGTGCT ATGTTTGCCG
TTAGTTAATC AAGGTAATTT AAGCGCGATT TTATACCTAG AAAATCAAGT TACCAGTGAT
GTGTTTACAA GCGATCGCCT CCTGGTGCTG AAATTCCTCT CTAGCCAAGC CGTGATCGCC
CTAGAAAATG CTCGTCTTTA TCATCAAGTG CAAAAAACCC TAGAGGATCT GCAACAAGCA
CAAGTGCAAA TTGTACAGAG TGAAAAGATG TCTGCATTGG GTAACTTAGT AGCTGGGGTG
GCTCACGAAA TCAACAATCC CGTCGGCTGT ATTGTTGGTA ATATTGGTGC AGCCCAAGAA
TATATTAACG ACCTGTTGGG AGTGATTGAC CTCTATGGTG AGAAATTTCC CCAGCCCGGT
ACGGAAATTG AAGATGAACT ACAGGCAATT GACTTAGAAT ATCTGCGGGA AGATTTGCCC
AAACTCATCA GGGCGATGAA AGACGGAAGC GATCGCATTA AGGCTATCAG TGAGAGTTTG
CGTACATTCT CCCGCGCCGA CAGCGACCAA AAACAGCCCT TTAACCTCCA CGACGGTCTT
GAAAGTACCC TGCTGATTTT ACGTCATCGT CTCAAAGCTA ACCAATATCG CCCAGCCATT
GAAGTTATCA CCGAATACGG CAATCTTCCC CTGGTGAAGT GTTTCCCTGG ACAATTAAAT
CAAGTCTTTA TGAATATTCT CGCCAATGCC ATTGATGCCT TAGATGAATC AAATCCAGGA
TATAGCTTTA CTGAAATTGA AGCCAACCCC AATCGAATTA TCATTCGCAC CACTGTCGCA
GGTGAACAAA TCAAGATTGC AATTAGTGAT AATGGTCACG GTATCCCAGA AGAAGTGAAA
GCCAAAATTT TCGATCACCT GTTCACTACC AAAGGAGTAG GTAAAGGTAC GGGTTTAGGA
CTAGCCATCG CCCATCAAAT TATCGTAGAG AAACATGGAG GGGCGATCGC GGTTAACTCT
CAACCAGGTA TAGGAACTGA GTTCTTATTA ACATTGCCAA TCTCTTAG
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| Protein sequence | MSATVDTTVL LSGYQLIEQL YHGSKTLVYR GIRRKESVAQ PVVIKLLQRD YPSFSELLQF
RNQYTITKNL NIPGVVRPSS LEPYGNSYAL VMEDFGGVSL GTYSQTHSLS LVDVLAIAIQ
LANILHDLYQ NRVIHKDIKP ANLLIHPDTK KIQLIDFSIA SLLPKETEAV KHPKVLEGTL
PYLAPEQTGR MNRGIDYRSD FYAFGVTLFE MLTGQLPFIS DDPLELVHCH IAKPAPSVCA
LRPEIPSVIG EIIGKLMAKN AEDRYQSALG LQYDLQNCLE QLQNTGKIEA FEIATRDICD
RFLIPEKLYG REEEVATLLT AFERVSNGNS ELMLVAGFSG IGKTAVVNEV HKPIVEKRGY
FIKGKFDQFN RSTPFSAFVQ AFRDLIGQLL SESDEQLQTW KTQLLQALGE NGQVIIEVIP
ELERIIGEQP PARELSGNAA QNRFKLLFQN FIHVFTKPEH PLVIFLDDLQ WADSASLNLM
QGLIAESKIG YLLLLGAYRD HEVYPAHPLM LTLEAIEKTG ATINTITLQP LSLTSLNQLI
TDTLNCTATL AQPLTKLVNQ KTQGNPFFAT QFLKALYQDE LIYFDLVTGY WQCDLVQVKA
AALTDDVVEF MALQLQKLPP VTQDILKLAA CIGNQFDLNT LAIVSEISPA ETSTILWKAL
QEELILPLSE TYKFFQSSPH QTTGDCQITI SYKFFHDRVQ QAAYSLIPQE QKTATHLRIG
QLLLTHTPET ELENRIFDIV NQLNVGVAYL TDQPEKQRLL ELNLMAGRKA KVATAYVVAV
DYLNTAIKLL EEDSWQNQYE LTLSLYDLVA ETEYLNTNFP TSELLVREIL VNAKHTLDKI
KAYEIQIQAY TAQNKLIEAI NIGREVLGLL GIDLPEDGNI ETIITEHGRL KSLFGERLIE
DLVNLPELTD LQQGAALRIL CGLFAPIYLA KPMLLPLKIF TMVKICIQYG NSPQSAIAYS
LYGLFLCASE EIADGYQFGQ LAMTVLDKFN AQELRSKVYL TFALFIKHWQ DSINSTLNIF
LEGLKSGLDT GDLEYVGYCA NCYAQFLFWT GQNLEIAEAE ANKYCALMQD LKQDVSLIWG
NTWRQTVMNL QAKVDNPQML VGECFDETVT LPALISSRNT NGICYVYLAK LFLAYLLGAD
EQAIKYASLF EEYEQGAAGL LIVPLKNFYQ SLSILSLYPK LDTEQQSRHL EKITNNQQKM
QNWADHAPLN YQHKFYLVAA EKHRVLDEKT AAIELYDQAI ALAKTNGYIQ EAALANELAA
KFYLDWGKEK VAAAYMQEAY YCYAHWGSLA KTNDLESRYP QLLRPILQQV IHPLSILETF
ASLTSSVHST RHQSSSSTSI NHMLDFAALL QVSQAISSTI QLDKLLQTMT ETVLENSGAD
YCALILCQEG EWQVKVIANS QQTSLQSTPL ENNPTVPVKL IQYVKNTLET VVIHDLKTEI
PGVMSNYLDQ HHPKSVLCLP LVNQGNLSAI LYLENQVTSD VFTSDRLLVL KFLSSQAVIA
LENARLYHQV QKTLEDLQQA QVQIVQSEKM SALGNLVAGV AHEINNPVGC IVGNIGAAQE
YINDLLGVID LYGEKFPQPG TEIEDELQAI DLEYLREDLP KLIRAMKDGS DRIKAISESL
RTFSRADSDQ KQPFNLHDGL ESTLLILRHR LKANQYRPAI EVITEYGNLP LVKCFPGQLN
QVFMNILANA IDALDESNPG YSFTEIEANP NRIIIRTTVA GEQIKIAISD NGHGIPEEVK
AKIFDHLFTT KGVGKGTGLG LAIAHQIIVE KHGGAIAVNS QPGIGTEFLL TLPIS
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