| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4500 |
|---|
| Symbol | |
|---|
| ID | 3680201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5636180 |
|---|
| End bp | 5637358 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719856 |
|---|
| Product | zinc-containing alcohol dehydrogenase superfamily protein |
|---|
| Protein accession | YP_324993 |
|---|
| Protein GI | 75910697 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.658078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.320847 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG TTTGCTGGCA CGGGACAAAT GATGTCAGGG TAGAAACTGT ACCCGATCCA
AAAATTCTTA ACCCGCGCGA CGCAATTATT AAAATTACAT CTACCGCTAT TTGTGGGTCT
GATTTACATA TATATAATGG CTATATTCCC ACAATGCAAA GTGGCGATAT CCTTGGTCAT
GAATTTATGG GGGAAGTTGT CGAGTTAGGT AGTGCTGTAA AAAATGTGAA AGTAGGCGAT
CGCGTGGTTG TCCCTTTCAC TATTTCCTGC GGTTCTTGCT TCTTCTGTCA ACGGGATTTA
TGGTCTTTGT GCGATAACTC CAACCCCAAC GCCTGGATGG TAGAACTGCA AATGGGGCAT
TCTCCAGCAG GTTTATTCGG CTACTCTCAT CTATTTGGCG GCTATGCTGG TGGTCAAGCA
GAATACGCCC GTGTACCTTT TGCAGATGTC GGTTTACTCA AAATCCCCGA TAATCTACCA
GATGAACAAG TATTATTTTT AACTGACATT TTTCCTACCG GCTATATGGC AGCGGAAAAC
TGCAACATCA AACCAGGCGA TATTGTGGCT GTGTGGGGTT GTGGCCCCGT CGGGCAATTT
GCTATCAAGA GTGCATATAT GTTGGGTGCG GAAAGAGTTA TCGCCTTTGA CCGCATCCCT
GAACGCCTAC AAATGGCTAA AGAACAATGT AATGCGGAAG TCCTCAATTA CGAAGAGGTA
AACATTGGGG AAGCACTGAA AGAAATGACT GGTGGACGCG GCCCTGATGC TTGTATAGAT
GCGGTGGGAA TGGAAGCCCA CGGTACAGAT TTGATGGCTT TCTACGACCA AGTAAAGCAA
GCTGTAAGGC TAGAAACAGA CAGACCAACA GCATTACGAC AAGTCATTGT GTCTGCGGCT
AAAGGCGGTC ATGTTTCCCT GGCTGGTGTA TATGGCGGCT TTCTAGACAA AATCCCGATG
GGTTCAGCAA TGAATAAGGG CTTAACTTTC AAGATGGGAC AAACTCATGT GCATAAATAC
TTGAGGCCTT TACTAGAACG CATTCAAAAC GGTGAAATTG ACACCTCATT TGTCATCACC
CACACCCTCC CCCTAGAACA AGCACCCCAC GGTTACGAAA TTTTTAAGCA CAAAAAAGAT
AACTGCATCA AAGTTGTACT CAAACCCTCA GGTAATTAA
|
|---|
| Protein sequence | MKAVCWHGTN DVRVETVPDP KILNPRDAII KITSTAICGS DLHIYNGYIP TMQSGDILGH
EFMGEVVELG SAVKNVKVGD RVVVPFTISC GSCFFCQRDL WSLCDNSNPN AWMVELQMGH
SPAGLFGYSH LFGGYAGGQA EYARVPFADV GLLKIPDNLP DEQVLFLTDI FPTGYMAAEN
CNIKPGDIVA VWGCGPVGQF AIKSAYMLGA ERVIAFDRIP ERLQMAKEQC NAEVLNYEEV
NIGEALKEMT GGRGPDACID AVGMEAHGTD LMAFYDQVKQ AVRLETDRPT ALRQVIVSAA
KGGHVSLAGV YGGFLDKIPM GSAMNKGLTF KMGQTHVHKY LRPLLERIQN GEIDTSFVIT
HTLPLEQAPH GYEIFKHKKD NCIKVVLKPS GN
|
|---|
| |