| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4489 |
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| Symbol | |
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| ID | 3680190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5620671 |
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| End bp | 5626223 |
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| Gene Length | 5553 bp |
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| Protein Length | 1850 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637719845 |
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| Product | serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor |
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| Protein accession | YP_324982 |
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| Protein GI | 75910686 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.613962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGGT TAGTTGGCTA TCAAAATTTG ACGCAAATTT ACGCTGGGAC AAGAACCCTA
ATTTATCGAG GGATTAGGGA AGAAGATCAA AAGCCAATAG TTCTTAAAAT ATTACGGTAT
GAATATCCTA GCTTTAGTGA ATTGGTACAA TTTCGTAATC AATATACTAT TACTAAAAAT
CTCCATATTC CTGGAATCAT TCAAACTTAT AGTCTAGAAA ATTATGAAAA TAGTTATGCT
CTAGTAATGG AAGATTTTGG GGGAATTTCT CTCAAAGATT GGTCAAACCA GAATAGCGAA
ATATCTTTAG ATGAGTTTTT TCATATAGCT ATTCAAATTG TCACCATCTT AGATGGACTG
TATCGGAGCC GGGTAATTCA CAAAGATATT AAACCCAGCA ACATCCTGAT TAATCCAATA
ACTAAAGAAA TCAGATTAAT TGACTTTGGG ATTGCATCCC TTCTTCCCAG AGAAACCCAA
ACTCTAACTA GTCCTAACGT TTTGGAAGGA ACCCTGGCTT ACCTTTCACC AGAACAAACG
GGACGCATGA ACCGGGGAAT TGACTATCGC AGTGATTTTT ACTCTCTTGG GGTGACTTTT
TTTGAACTCC TCACAGGACA GTTACCTTTT TGCTGTGATG AGCCCATGAA GTTACTCCAC
TGTCATATTG CCAAACATCC GCCACAAGTC CACGAAATTA ATTTTACTAT TCCTTTAGCT
GTGTCTAACA TTGTCTTCAA GCTGATGGCT AAAAATGCTG AAGACAGATA CCAAAGTGCT
TTGGGGTTAA AACATGATTT GGAAACTTGC TGGCGACAAT GGAAAACCCA AGGAGAAATT
AGCGCTTTTG AGTTGGGGAG GAGGGATATT TGCGATCGCT TCATTATCCC AGAAAAACTG
TATGGTCGCC AAGCAGAAGT TCAACAATTA CTCGCCACTT TTGAGAGAGT ATCCCAAGGA
CATAGGGAAA TGATATTAGT TGCGGGGTTC TCTGGTATCG GGAAAACTGC AATTGTTAAC
GAAATCCACA AACCAATTGT TAAACAAAGC GGGTATTTCA TTAAGGGTAA ATATGACCAA
TTCCAACGGA ATATCCCTTT ATCTGCGATC GTCCAATCAT TTCAGGATTT GATGGGACAA
TTATTGGGTG AAGCCAATAC TCAAATTCAA GACTGGAAAA CACGGATTTT AGCCGCATTG
GGAGAACAAG GTCAGGTAAT TATCGATGTT ATCCCCGAAC TGCAATCAAT CATTGGTCAG
CAACGTCAAG TTACAGAACT TGAACCCAGT GCAGCACAAA ATCGCTTCAA TACACTCTTC
TTGAAGTTTA TTCAAGTCTT CACAACTAAG GAACATCCTC TAGTCATTTT CCTCGATGAT
TTACAATGGG CTGACTCCGC ATCATTAAAG TTAATTCAGT TATTGATGAG CCAAAGAGAT
AATCATTATC TATTGCTGAT AGGAGCTTAT CGTGATAACG AAGTATCTTC AGGACATCCT
CTAATTTTAA CCCTACAGGA TATTCAAAAA AACACAGAAA TTATCGAGAC TATTACTCTA
AAACCTCTAG AGCTTTTGGA TTTAAACTAT CTTGTTGCTG ATACGCTTAA ATGCGATAAA
GAAGTGGCTT TACCATTAAC ACAGTTAGTA TATCAAAAAA CACAAGGTAA TCCTTTTTTT
AGCAATCAGT TTCTTAAATA TCTATATAAT GAAAATTTAA TTAGCTTTAA TTTTGATAAA
GGTTTTTGGG AATGTAATAT AGCCCAAGTT AAGACATTAT CTCTAACAGA TGATGTCGTT
GATTTCATGT CATTGCAACT GCAAAAGTTA CCTGAAGCAA CGCAGAATGT TTTGAAATTA
GCTGCTTGTA TTAATAATCA TTTTAACTTA TCCGTTCTAG CAAATATTTA CGAAACATCT
CTTGCAGAAA CAGCAGCAGC TTTATGGACA GCTTTACGAG AGGGTTTAAT AATTCCGACA
AACAAAGTTT ATAAATTTTT TCATGATGAT TTATCTCTCA ATAATTCTTA TAATTTAAAC
AATAATATTG AACCCATCAC AGTTGAATAT AAGTTTCTCC ATGACCGTGT TCAACAAGCT
GCTTATAGTT TAATTCCCGA AGATAACAAA AAACTTACCC ACTTAAAAAT TGGGCAGTTA
ATGTTAGCCA ACAGCACCCC AGAAACCAGA GAAGACAAGA TTTTTGAAAT AGTCAATCAA
TTCAATATTG GGGTAGATTT AATTACAGAA GCGCCAGCAC GTCATGAATT AGCACAGCTA
AATTTACAGG CTGGAACTAA AGCTAAAAGT GCTACTGCTT ACAGTGCAGC CATAGAATAT
ATAAATTTAG GGATAGGATT ACTGACAGCA AATCGTTGGG AAAGTCAATA TAGGTTGACA
TTAACACTAT ATTCAGAAGC AGTTGAAATA GCTTATCTTA GTACAGAATT TCAGAGGATG
GAAACCCTAG CTCAAACTGT GCTAAAAAAT GCCAAAATAT TACTAGATAA AATCAATATT
TATAGCATTA AAATACAAGC CTGCATTGCT CAAAATCAAC TGTTATTAGG TATTGAAACT
GCTTTGCCCG TTTTGCAAAT GCTAGGTGTA CATTTACCTC CTAAACCTAC ACAAACAGAC
ATTGTTAAGT CGCTCCAAGA TGCAAATTCA GTACTAATGG GTAATACAAC TTCAGATTTA
ATTAATTTAC CCAAAATGGA CAATCCTGAA AAATTAGCAG CCTTGTCTAT TCTTTCTAGT
ATGTTTGGTG CTGCTTATAA TGGTTATCCC GCAATGTTCC CTCCATTGAT TTGTGAGGAA
GTAATATTAT CAGTTAAGTA TGGTAATGCA CCTGTTTCAG CTTTTGCTTA TGCTAGTTAC
GGCGCAATTT TACTCACATT TATGGGAGAT ATTGATGCTG GCTATGAATT TGGTAACCTT
GCTTTGAATT TAATCGCCAA GCTAGATGCT AAGGAACTAA AAGCAAAAAC TTTTTGTGTA
GTTAGTTGTT TGATTAAACA TTGGAAAAAA CATCTCAGAT ATACGTTCCC ACTATTTATT
GAAGGGTATC ATAGTGGTTG GGAAACTGGA GACTTAGAAT GGTCGGCTTG GTGTGCTTTT
TCCTATACTC TTTACTTGTA TTTAGCTGGC ACCGAACTAT ATAGCCTAGA GCAAGAAATG
TCCATCTATT CTCAGGCGAT CGCCCAATTT AAGCAAAAGA CATCTCTCAA TTATCTTAAC
ATCTATTACC AGTCTGTTTC CTGCTTGCTT GGTGTTACAG AAAACCACCT ACAAATTAAG
GGCAATATAT ACGATGAAGC AGTCATGTTA TCAATACATG AGCAGGCAAG TGACCGCCCA
GCAATTTATC ATTTATATAT TAACAAACTG ATTCTTTGTT ACCTATTTTG CGAGTATGAA
CAGGCAATTA AGAATGCAGA AATTGCTGAA CAGTATTTAG ATGGTGTTCT AGGAATATAT
GTTGTTGTAC TTTTACCATT TTATGATTCC CTGGCTCGTC TAGCGTTATA TCCCCATACA
ACAGTTGATA TTCAACAGAA GATTCTGCAT CGAGTTAGTG AGAATCAAGC CAAAATCAAA
CAATGGGCAG ATTATGCCCC AATGAATCAT CAGCATAAAT TTTATTTAGT AGCAGCAGAG
CAAAATCGCG TTCTTGGTAA ATATCTAGAG GCGATGAATG AGTATGACCT TGCTATTACA
AAGGCTAAAG AAAATAAGTA TTTACAAGAA GAAGCCTTAG CCAATGAATT AGCAGCTAAA
TTTTACTGGG AATTGGGTAA AGAGAAAATA GCTCAAGTTT ACTTTACTGA TGCTTATTAT
GCTTATACAC GTTGGGGGTC TATAGCAAAA GTCAAGGATT TAGAGCAGCG TTATTCTCAG
CTATTTTCTC TTCTATCTCG ACGCTCGAAC TTGATATTCA ACCCCAATGA TACAATTGTC
AAACATGATT CTAATTCCTC ACATATTCAT CAAACCCAAC ATAATACTCA TTACTATAGT
ACGACAAATT CTAATGTCTT AGATTTATCT AGTGTCATTA AAGCTTCCCA AGCCCTAGCG
AGTGAAATCA AGCTTGATAA ACTACTTTCT GCATTAATGG AATTGGTAAT CGAGAATGCA
GGAGCAAAAA AATGTGTGTT AGTTTTACTC AAAAATGAAA AATTAGTGAT TGAGGCGATC
GCCTCAATCA ATCAAATTCC CATATCAACT ATTTTGGTAT CAATACCAAT TGCAGAAAGT
GACGAAATTC CTATCTCTTT AATTAACTAT GTATCTCATA CTTCTCAAAC CTTAGTAATT
GATGATGCGA CAATTGAGGA TTCATTTATC TCCGATCCCT ATATCCAAAA AAAAGAACCC
AAAAGTTTAT TATGTACTCC CATCATCAAA CAAGGTAAAT TGATGGGCAT ACTATATCTA
GAAAATCATT TAACCACAGG GGCATTTACT AGCGATCGCC TACAAGTTAT TAACCTATTA
ATGGCCCAAG CCGCTATATC TCTAGAAAAT GCGCAGCTTT ACGGACAACT AGCAGAATAT
TCTCAAAATC TAGAATTAAA AGTTGAGCAA CGTACTCAAG AATTAAAAGA AAAAGCCAAC
CAATTAGAGT CCGCACTGCA AAAACTTTCC TCAACCCAAT CACAATTAGT TCAAGCCGAA
AAAATGTCTA GCCTGGGTCA ATTAGTTGCT GGTATTGCTC ATGAAATTAA CAACCCTGTT
AGCTTTATTT ACGGCAATTT GACCTACACA TCTGAATACA TTAACTCCTT ATTGGATTTG
ATTAATTTAT ACCAGCAATT ATATTCCCAA CCCCTACCAG AAATTCAGCA AAGAATCTCA
GATATTGAAC TAGATTTCAT CACAGAAGAT TTGCCTAAAA TGCTTAAATC CATGCGGTTT
GGAGCGCAAC GCATAGAAGA GATTGTTTCA TCTTTACGGA CTTTTGCACG ATTAGATGAA
GCAGGAATGA AACGAGTAGA CATTCACTCT GGTATTGATA GCACTTTGTT AATTTTGCAA
CATCGGCTGA AATTTAAGCA AAATAGGCAA TCTTTACCTA TAGCCGTCAA ACAAAACTAC
GGTAATATCC CACAAATTTA CTGTTATGCT TCCGAGTTAA ATCAAGTCTT TATCAGCATC
CTCAGTAATG CCATAGACGC TTTGCAAGAG GATGTAAGTA ATCAATCAGG GAGAGAAAAA
CAGCCGACAA TTACCATATC TACAGAGGTC AAAAATGCAG AATCAATACT AATTCGCATT
GCTGATAATG GCCCTGGTAT GAGCGATTCA GTACTCAGTA AAATATTTGA CCCCTTTTTT
ACAACTAAAC CAGTGGGTAG TGGTACAGGT CTAGGACTAT CGATCAGTTA CGCGATCGTG
GTAGAAAAGC ATGGTGGTCA ATTACTTTGC TCCTCTGGCC CAGGCATGGG TACAGAGTTC
ACCATTGTAA TCCCTATTCA GACTTTTGAT ACTGCAATCA GTAGAGAAAC AACTAACACC
AATTCAAAAT TAAGAAAGTG TGATTCAGCA TAG
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| Protein sequence | MLRLVGYQNL TQIYAGTRTL IYRGIREEDQ KPIVLKILRY EYPSFSELVQ FRNQYTITKN
LHIPGIIQTY SLENYENSYA LVMEDFGGIS LKDWSNQNSE ISLDEFFHIA IQIVTILDGL
YRSRVIHKDI KPSNILINPI TKEIRLIDFG IASLLPRETQ TLTSPNVLEG TLAYLSPEQT
GRMNRGIDYR SDFYSLGVTF FELLTGQLPF CCDEPMKLLH CHIAKHPPQV HEINFTIPLA
VSNIVFKLMA KNAEDRYQSA LGLKHDLETC WRQWKTQGEI SAFELGRRDI CDRFIIPEKL
YGRQAEVQQL LATFERVSQG HREMILVAGF SGIGKTAIVN EIHKPIVKQS GYFIKGKYDQ
FQRNIPLSAI VQSFQDLMGQ LLGEANTQIQ DWKTRILAAL GEQGQVIIDV IPELQSIIGQ
QRQVTELEPS AAQNRFNTLF LKFIQVFTTK EHPLVIFLDD LQWADSASLK LIQLLMSQRD
NHYLLLIGAY RDNEVSSGHP LILTLQDIQK NTEIIETITL KPLELLDLNY LVADTLKCDK
EVALPLTQLV YQKTQGNPFF SNQFLKYLYN ENLISFNFDK GFWECNIAQV KTLSLTDDVV
DFMSLQLQKL PEATQNVLKL AACINNHFNL SVLANIYETS LAETAAALWT ALREGLIIPT
NKVYKFFHDD LSLNNSYNLN NNIEPITVEY KFLHDRVQQA AYSLIPEDNK KLTHLKIGQL
MLANSTPETR EDKIFEIVNQ FNIGVDLITE APARHELAQL NLQAGTKAKS ATAYSAAIEY
INLGIGLLTA NRWESQYRLT LTLYSEAVEI AYLSTEFQRM ETLAQTVLKN AKILLDKINI
YSIKIQACIA QNQLLLGIET ALPVLQMLGV HLPPKPTQTD IVKSLQDANS VLMGNTTSDL
INLPKMDNPE KLAALSILSS MFGAAYNGYP AMFPPLICEE VILSVKYGNA PVSAFAYASY
GAILLTFMGD IDAGYEFGNL ALNLIAKLDA KELKAKTFCV VSCLIKHWKK HLRYTFPLFI
EGYHSGWETG DLEWSAWCAF SYTLYLYLAG TELYSLEQEM SIYSQAIAQF KQKTSLNYLN
IYYQSVSCLL GVTENHLQIK GNIYDEAVML SIHEQASDRP AIYHLYINKL ILCYLFCEYE
QAIKNAEIAE QYLDGVLGIY VVVLLPFYDS LARLALYPHT TVDIQQKILH RVSENQAKIK
QWADYAPMNH QHKFYLVAAE QNRVLGKYLE AMNEYDLAIT KAKENKYLQE EALANELAAK
FYWELGKEKI AQVYFTDAYY AYTRWGSIAK VKDLEQRYSQ LFSLLSRRSN LIFNPNDTIV
KHDSNSSHIH QTQHNTHYYS TTNSNVLDLS SVIKASQALA SEIKLDKLLS ALMELVIENA
GAKKCVLVLL KNEKLVIEAI ASINQIPIST ILVSIPIAES DEIPISLINY VSHTSQTLVI
DDATIEDSFI SDPYIQKKEP KSLLCTPIIK QGKLMGILYL ENHLTTGAFT SDRLQVINLL
MAQAAISLEN AQLYGQLAEY SQNLELKVEQ RTQELKEKAN QLESALQKLS STQSQLVQAE
KMSSLGQLVA GIAHEINNPV SFIYGNLTYT SEYINSLLDL INLYQQLYSQ PLPEIQQRIS
DIELDFITED LPKMLKSMRF GAQRIEEIVS SLRTFARLDE AGMKRVDIHS GIDSTLLILQ
HRLKFKQNRQ SLPIAVKQNY GNIPQIYCYA SELNQVFISI LSNAIDALQE DVSNQSGREK
QPTITISTEV KNAESILIRI ADNGPGMSDS VLSKIFDPFF TTKPVGSGTG LGLSISYAIV
VEKHGGQLLC SSGPGMGTEF TIVIPIQTFD TAISRETTNT NSKLRKCDSA
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