Gene Ava_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4482 
Symbol 
ID3680338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5612960 
End bp5613946 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content45% 
IMG OID637719837 
Productalcohol dehydrogenase 
Protein accessionYP_324975 
Protein GI75910679 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID[TIGR02822] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA TGATTTTAGA CGCACCGCGT CAACCCTTAC GCCTGACAGA GTTACCAATA 
CCAAGACCTA ATTCTGAGCA AGTATTGATT CGCGTTCATG CTTGCGCCGT CTGTCGCACT
GATTTACATA TAGTGGATGG AGAATTGACA CACCCAAAAC TACCTTTGAT TTTGGGACAT
CAAATTGTAG GGACGATTGA GGCTTTAGGG GAAAAAGTTG ATCAATTTCA TCTAGGTCAA
AGGGTTGGTG TACCTTGGTT GGGTCATACT TGCGCTCATT GTCCTTACTG TCTCTCTGGG
CGGGAAAACC TCTGTGATTA TGCTGAATTT ACAGGTTATA ATATAGACGG CGGCTATGCA
GACTATACAG TAGCTGACCA CCACTTTTGT TTTCCTTTAG ACCCCACTTA TCCAGACTTA
CAAGCTGCAC CTCTGTTATG TGGCGGTTTA ATTGGCTACC GGGCTTACAA TATGACTGGA
GATGCTGAGA AACTCGGTTT TTACGGTTTC GGTTCCTCTG CTCATATCTT AATTCAGTTA
GCACGTTATC AAGGGCGCAA AGTATTTGCT TTCACTCGTC CTGGGGATAT TGATGGGCAA
GAATTTGCCC GTCAATTAGG TGCAAATTGG GCTGGTGACT CAGATGTATT ACCGCCAGAA
TCTTTAGATG CAGCAATTAT TTTTGCACCA GTGGGGAAAC TAGTTCCTAC CGCCTTGCGT
GCAGTTGCTA AAGGTGGTGT AGTCGTTTGT GCTGGTATTC ATATGAGCGA TATCCCCTCA
TTTCCCTACA GCATTCTTTG GGAAGAACGG GTGTTAAGGT CTGTAGCTAA TTTAACACGC
CAAGATGGCG AAGAGTTTCT GACTATCGCG CCGCAAATTC CCATCCGGAC AAAGATTAAT
TCTTTCCCCT TGACTCAAGC TAATGAGGCT TTAGATGCGC TACGTAGTGG CAAAATAGAG
GGGTCTGCTG TTTTAGTGAT GAAGTGA
 
Protein sequence
MRAMILDAPR QPLRLTELPI PRPNSEQVLI RVHACAVCRT DLHIVDGELT HPKLPLILGH 
QIVGTIEALG EKVDQFHLGQ RVGVPWLGHT CAHCPYCLSG RENLCDYAEF TGYNIDGGYA
DYTVADHHFC FPLDPTYPDL QAAPLLCGGL IGYRAYNMTG DAEKLGFYGF GSSAHILIQL
ARYQGRKVFA FTRPGDIDGQ EFARQLGANW AGDSDVLPPE SLDAAIIFAP VGKLVPTALR
AVAKGGVVVC AGIHMSDIPS FPYSILWEER VLRSVANLTR QDGEEFLTIA PQIPIRTKIN
SFPLTQANEA LDALRSGKIE GSAVLVMK