Gene Ava_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4478 
Symbol 
ID3680334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5609023 
End bp5609916 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content45% 
IMG OID637719833 
Productnitrogenase reductase 
Protein accessionYP_324971 
Protein GI75910675 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG ACAAGAAAAT TAGACAAATT GCTTTCTACG GTAAAGGCGG TATTGGTAAG 
TCTACCACTT CTCAAAACAC CTTGGCAGCT ATGGCAGAAA TGGGTCAACG CATCCTCATC
GTAGGTTGCG ACCCTAAAGC TGACTCCACC CGTTTGATGC TCCATTCCAA AGCTCAAACC
ACCGTACTTC ACTTGGCGGC TGAACGTGGT GCAGTAGAAG ACCTCGAACT CGACGAAGTA
ATGCTGACTG GTTTCCGTGG CGTTAAGTGC GTAGAATCTG GTGGTCCAGA ACCCGGTGTA
GGTTGCGCTG GTCGTGGTAT CATCACCGCC ATTAACTTCT TAGAAGAAAA CGGCGCTTAC
CAAGACGTTG ACTTCGTATC TTATGACGTA TTAGGCGACG TTGTATGCGG TGGTTTCGCA
ATGCCTATCC GCGAAAATAA AGCGCAAGAA ATCTACATCG TTACCTCTGG TGAAATGATG
GCGATGTATG CTGCTAACAA CATCGCTCGT GGTATTTTGA AATATGCACA CACTGGTGGT
GTACGTTTAG GCGGCTTGAT TTGTAATAGC CGTAACGTTG ACAGAGAAAT CGAACTCATC
GAAACTCTGG CAAAACGTTT GAACACCCAA ATGATTCACT ACGTACCCCG CGACAACATT
GTTCAACACG CTGAGTTGCG CCGGATGACA GTTAACGAAT ACGCACCCGA CAGCAACCAA
GGTAACGAAT ACCGGATTTT GGCTAACAAA ATCATCAACA ACGAAAACCT AAAGATTCCT
ACCCCAATTG AGATGGAAGA ATTAGAAGAG TTGCTGATTG AGTTCGGTAT TCTCGAAAGC
GAAGAAAATG CTGCAAAAAT GATTGCTACA ACTTCAGAAA GCAAATCTAA GTAA
 
Protein sequence
MSIDKKIRQI AFYGKGGIGK STTSQNTLAA MAEMGQRILI VGCDPKADST RLMLHSKAQT 
TVLHLAAERG AVEDLELDEV MLTGFRGVKC VESGGPEPGV GCAGRGIITA INFLEENGAY
QDVDFVSYDV LGDVVCGGFA MPIRENKAQE IYIVTSGEMM AMYAANNIAR GILKYAHTGG
VRLGGLICNS RNVDREIELI ETLAKRLNTQ MIHYVPRDNI VQHAELRRMT VNEYAPDSNQ
GNEYRILANK IINNENLKIP TPIEMEELEE LLIEFGILES EENAAKMIAT TSESKSK